Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3090 ATGGTATGCGGAATTTTGATTCGAGCTGGAATTTTCACCAAGAGATTGTTGCCATTCAATTACGTTCGGAGGAAGTGTTTGCAAAGAGTTGTTGTTTTTCATTCACAATTTGTTGCGAATCGCGTGTTTAGGAATAAGTACATAGGGATGATGGTTGATACAGGTTCTATGTCAACAAGGGCTGGACCCTCTGTGGAGGATACTGTGTCCCACAAAGAGGATGATTCTGCTCGTTCTGGTTTTGTTACTGGTGGATGCAAGAGTGAAGATGAAAGACTTAGCTGTGGGTATTCAAGCTTTAGGGGGAAGAGAGTGACCATGGAGGATTTCTATGATATTAAGACATCAACCATTGATGGCCGATCAGTGTGCTTATTTGGAATATTTGATGGTCATGGTGGTTCTCGCGCTGCTGAGTATTTGAAGGATCATCTTTTTGAGAATCTCATGAAGCATCCGAAGTTTTTGACGGATACCAAATTGGCTATAAGTGAAACATATCAGCAGACGGATGCTGAGTTTTTGAACTCTGAAAAAGATAATTTCCGGGACGACGGTTCTACTGCTTCAACCGCTGTTTTGGTTGATAACCGTCTTTATGTTGCTAATGTTGGAGATTCTAGAACTGTTATATCAAAAGCTGGAAAAGCAATTGCTCTCTCTGAAGATCATAAACCTAATAGAAGTGATGAACGGAAGAGAATTGAGAATGCTGGGGGTGTTGTCATGTGGGCAGGTACTTGGAGAGTTGGAGGGGTGCTAGCAATGTCCCGTGCATTTGGCAACCGTATGCTGAAGCCATTTGTTGTAGCAGAACCTGAAATCCAGGACCAGGAGATAGATGAAGAAACTGAGGTGCTTGTTCTTGCAAGTGATGGACTCTGGGATGTAGTACAGAATGAGGATGCTGTTTCTCTTGCACGCGCGGAAGAGGGAGCTGAGGCAGCTGCTCGTAAGTTAACGGAAGCCGCTTTTAATCGTGGTAGTGCAGATAACATTACTTGTATTGTGGTACGATTCAATCATGAAAAAAGACACGCAGCTAATCCTGATAAAGCTAGTACAGCTAGCAGTCAGCATGAGCAGAGACAATGA 1095 0.432 MVCGILIRAGIFTKRLLPFNYVRRKCLQRVVVFHSQFVANRVFRNKYIGMMVDTGSMSTRAGPSVEDTVSHKEDDSARSGFVTGGCKSEDERLSCGYSSFRGKRVTMEDFYDIKTSTIDGRSVCLFGIFDGHGGSRAAEYLKDHLFENLMKHPKFLTDTKLAISETYQQTDAEFLNSEKDNFRDDGSTASTAVLVDNRLYVANVGDSRTVISKAGKAIALSEDHKPNRSDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKPFVVAEPEIQDQEIDEETEVLVLASDGLWDVVQNEDAVSLARAEEGAEAAARKLTEAAFNRGSADNITCIVVRFNHEKRHAANPDKASTASSQHEQRQ* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3090 364 MobiDBLite consensus disorder prediction 59 83 - -
Mtr3g3090 364 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 63 352 - -
Mtr3g3090 364 ProSitePatterns PPM-type phosphatase domain signature. 125 133 IPR000222 GO:0043169
Mtr3g3090 364 PANTHER ALPHABET, ISOFORM E-RELATED 63 352 - -
Mtr3g3090 364 SMART PP2C_SIG_2 90 340 IPR001932 -
Mtr3g3090 364 SUPERFAMILY PP2C-like 91 342 IPR036457 -
Mtr3g3090 364 Pfam Protein phosphatase 2C 96 333 IPR001932 -
Mtr3g3090 364 ProSiteProfiles PPM-type phosphatase domain profile. 94 340 IPR001932 -
Mtr3g3090 364 Gene3D - 84 349 IPR036457 -
Mtr3g3090 364 CDD PP2Cc 94 340 IPR001932 -
Mtr3g3090 364 SMART PP2C_4 84 338 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3090 Mtr-Chr3 44826003 44832337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3090 1 361 PP2C-type Phosphatase Gene Family AT5G53140 64.267 1.58e-165 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3090 K17506 - gmx:100813138 499.975