Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3089 ATGATGGAGTGCAACAAAGATGAGGCAGTCAGGGCTAAAGAAATAGCGGAGAGGAAATTTTCTGAAAGGGAATATATTGGTGCAAAGAAGTTTGCTATCAAGGCTAAAAATTTGTATGCTGATTTGGAGGATATTTCCCAGTTTTTGACTACTATTGATATTTATATATCTGCTGAGAACAAAGTAAGTGGAGAAATGGATTGGTATGGTATACTTGGAGTGAGTCCCTTTGCTGATGAAGAGACTGTTAGAAAGCAGTACAGGAAACTGGCTCTCACCCTTCATCCTGACAAAAACAAGTCTTTAGGTGCAGAGGGTGCATTTCAGCTGGTTTCAGAGGCATGGAGTTTGTTATCAGATAAGACCAAGAGACTAGAATATAACCAGAAGAGGAGTTTGAAAGGCTTCCAACATACTACTCCAAACCGTGCTGGGCATCCATCAAATGTACCTAGTTCAAATGGTTATTATCATTTTAAGAAGAATGCAACTTCAAATGTGAGGACTGGGAATCATAATGCTCGGGCTCCTGCCACTTCTGCCCCTCCACAGAAAAAGGCTGAAACCTTTTGGACTATCTGTAATAAGTGCAGGACACATTATGAATATCTCAGAATTTATTTGAATCACACTCTTCTATGTCCCAACTGTAATGAAGCTTTTGTGGCCATAGAGAGGAGTCCTCCTCCCAATGTTTTTAAGCCATCAAGTTTGCCCTCCCATCAACAGCACCAGAATTCACGACGTCATCCTGGAAGTAATAATTCAAACCTTCAGTGGGGTTCCCACTCCAGAATGGCTGGTTTTGGTAGCGCCGATGGATCGTCGTCTGTGGCCGCTCAAGCTGCAAGTGTCGTGCAAAAGGCAAGTGAGAAAGTGAAGAGAGAAGGAGCACCATCAATTGCTGAATGGGAGAGGATTCAAATGTCTAAGAAAGCTGATGGTTCTATGAAGAAAAGGAAGGTAGATGATATTCACGTTAATGGCTATCCAGGATATACGGCAAATCATTTTGCTACGGGATCTGGAGCAGCAGGTTTGGGCAGTTTCTCTGGATCAGGAAAGGCTAACTTGGAAAAAGAAAGGACCTATGGTTTTTCAGGTCTTGGAGGCAAACATTACAGCATACGAGAGTTGTCATTGTTTGAGTTACGAAACATGTTGATGGATAAGGCACGGAATGAAATTAGTAAAAAACTTGAAGAATTGAGGTTAATGGCTGAAGCTAAGATTGCCAACAAGAATAAGAGACAGAAAAACATATTCAATGACAAAACAAGTGGTTCAGAGAAGTATGGAGAGTCCAATGTTAATGGTAACAAGCATTTTTCTATTGATTCTTTACCTGTCACATCTGATGGTACAGTTAAGAGCCAAGCCTATGTTACAATCAATGTTCCAGATCCTGATTTTCACAATTTTGACCTGGATAGAGCTGAAAGTTCCTTTGCAGAGGACCAGGTCTGGGCTGCTTATGACGATGATGATGGAATGCCTAGATATTATGCTAGAATTCACAAGGTGATCTCCACAAAGCCATTTAGAATGCGGATTAGTTGGCTTAACTCTCGAAGCAACAGTGAATTGGGCCCAATAGATTGGGTAGGTTCTGGTTTTTATAAAACTTGTGGGGATTTCAGGACTGGCAAGCATGAAGTATCTGAATCATTAAATTCATTTTCACACAAGGTTAGGTGGACAAAAGGCACCAGAGGAGTTGTCCGCATCTTTCCAGGTAAGGGGGAAGTCTGGGCACTTTATAGAAACTGGTCTCCTGATTGGAATGAACATACTCCAGATGAAGTGATACACAAGTATGACATGGTGGAAGTACTTGATGATTTCAGTGAAGAGCAAGGTATATTAGTTACTCCCCTTGTTAAGTTTCCTGGCTTTAGGACAGTATTTCGAAGGCACCAGGACCAGAATGAGGTTAGGAGGATTCCTAAAGAGGAGATGTTTCGATTCTCTCATCAGGTTCCTAATCACTTGCTCAGTGGCCAGGAAGCTCATAACGCTCCAATAGGTTGCCGAGAGTTGGATCCAGCAGCTACACCTTTAGACCTCCTTCAGATAGCAACAGAAGCTAATGAGGCAGCAGGTAATGTTTAG 2112 0.419 MMECNKDEAVRAKEIAERKFSEREYIGAKKFAIKAKNLYADLEDISQFLTTIDIYISAENKVSGEMDWYGILGVSPFADEETVRKQYRKLALTLHPDKNKSLGAEGAFQLVSEAWSLLSDKTKRLEYNQKRSLKGFQHTTPNRAGHPSNVPSSNGYYHFKKNATSNVRTGNHNARAPATSAPPQKKAETFWTICNKCRTHYEYLRIYLNHTLLCPNCNEAFVAIERSPPPNVFKPSSLPSHQQHQNSRRHPGSNNSNLQWGSHSRMAGFGSADGSSSVAAQAASVVQKASEKVKREGAPSIAEWERIQMSKKADGSMKKRKVDDIHVNGYPGYTANHFATGSGAAGLGSFSGSGKANLEKERTYGFSGLGGKHYSIRELSLFELRNMLMDKARNEISKKLEELRLMAEAKIANKNKRQKNIFNDKTSGSEKYGESNVNGNKHFSIDSLPVTSDGTVKSQAYVTINVPDPDFHNFDLDRAESSFAEDQVWAAYDDDDGMPRYYARIHKVISTKPFRMRISWLNSRSNSELGPIDWVGSGFYKTCGDFRTGKHEVSESLNSFSHKVRWTKGTRGVVRIFPGKGEVWALYRNWSPDWNEHTPDEVIHKYDMVEVLDDFSEEQGILVTPLVKFPGFRTVFRRHQDQNEVRRIPKEEMFRFSHQVPNHLLSGQEAHNAPIGCRELDPAATPLDLLQIATEANEAAGNV* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3089 703 Gene3D DnaJ domain 64 176 IPR036869 -
Mtr3g3089 703 PRINTS DnaJ domain signature 69 87 IPR001623 -
Mtr3g3089 703 PRINTS DnaJ domain signature 87 102 IPR001623 -
Mtr3g3089 703 PRINTS DnaJ domain signature 103 123 IPR001623 -
Mtr3g3089 703 MobiDBLite consensus disorder prediction 236 273 - -
Mtr3g3089 703 CDD DnaJ 67 120 IPR001623 -
Mtr3g3089 703 SUPERFAMILY Chaperone J-domain 57 127 IPR036869 -
Mtr3g3089 703 Pfam DnaJ domain 67 128 IPR001623 -
Mtr3g3089 703 SMART dnaj_3 66 123 IPR001623 -
Mtr3g3089 703 PANTHER BNAC03G44070D PROTEIN 2 698 - -
Mtr3g3089 703 MobiDBLite consensus disorder prediction 232 273 - -
Mtr3g3089 703 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Mtr3g3089 703 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Mtr3g3089 703 PANTHER HEAT SHOCK PROTEIN-LIKE 2 698 - -
Mtr3g3089 703 MobiDBLite consensus disorder prediction 134 153 - -
Mtr3g3089 703 Coils Coil 389 417 - -
Mtr3g3089 703 Pfam Domain of unknown function (DUF3444) 463 669 IPR024593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3089 Mtr-Chr3 44817157 44821698 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3089 5 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.760 3.81e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3089 - - mtr:MTR_3g091040 1392.1