Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3081 ATGGGAGATTCAAAGAACTTAATAGATGAGCTACTACATGGATTGGAGTTGGCAAGACAGCTTCAAATCTATCTCAACGTGTCTTCTTCGTCCAATGAAACACGTGAGATTTTGATCCAGAAAATTATATCCACGTTTGAAAAGGCACTTGAAATGGTTAACCGTAAAAGACATGTTAATATGGGTGAGTCTTCAAAGCAACAATACCCCTCAGCCTCAGGAACACTTGCCATCCGAATATCAGATTCACCACCTTTGAGCTGTAGTCCACGAAGTGAAGACTCCGACAGAGATTTTAACCGTGATCACAATGCTTCTAGAAAAAGGAACACTCTACCAATTAGATGGACAAAACATATTCGAGTTGAACCAGGAATGGCAATGGAAGGTCCTCTTGATGATGGGTATAGTTGGAGAAAATATGGTCAGAAAGACATCCTTGGAGCCATGCATCCAAGAGGCTATTACAGATGCACTCATAGAAACGTTCTAGGATGTTTGGCAACAAAGCAAGTACAAAGATCTGATGAAGACCCAACAATCTTCGAAATCACATACCGAGGAAACCACACATGCACAATTGCTTCCAATGTGGTTGGTCCAACATTAAATAATCCATTCCAAACACAAGAAACAAATATTGTTAACACAAACCCTCAAAGCCTTGATCAACAAAAACCACCAAATGAACAACTTTTGAACAACCTACGAACAGGTCTAAGAGTTCAAACTGAGAACCTAGATTTCCAAAACCAATCATTTGTTCCATTTGGAAACCATGTACTTGAAAGTAGCTTTGCTGAAAACTTCAATTCTCCTTCATATGTTTCCCCTGCAAATTCAGGAATAAGTCACTTCTCGATGTCTCCAACTCCAAGTGTGTTCCCAAATATGGCAAGTGAGATTATTCCACCAGCTACTTCTGCTGCAAACACACCAACGGCTTCAATGGAGTTTCCATTTGATCAATTTGAATTTGATGGCCAAAACTTCACCTTCCACAACTCACGATTTTTCTCTTAA 1023 0.3969 MGDSKNLIDELLHGLELARQLQIYLNVSSSSNETREILIQKIISTFEKALEMVNRKRHVNMGESSKQQYPSASGTLAIRISDSPPLSCSPRSEDSDRDFNRDHNASRKRNTLPIRWTKHIRVEPGMAMEGPLDDGYSWRKYGQKDILGAMHPRGYYRCTHRNVLGCLATKQVQRSDEDPTIFEITYRGNHTCTIASNVVGPTLNNPFQTQETNIVNTNPQSLDQQKPPNEQLLNNLRTGLRVQTENLDFQNQSFVPFGNHVLESSFAENFNSPSYVSPANSGISHFSMSPTPSVFPNMASEIIPPATSAANTPTASMEFPFDQFEFDGQNFTFHNSRFFS* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3081 340 MobiDBLite consensus disorder prediction 80 106 - -
Mtr3g3081 340 ProSiteProfiles WRKY domain profile. 127 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr3g3081 340 SUPERFAMILY WRKY DNA-binding domain 130 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr3g3081 340 Gene3D WRKY domain 120 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr3g3081 340 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr3g3081 340 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 338 IPR044810 GO:0003700
Mtr3g3081 340 MobiDBLite consensus disorder prediction 91 106 - -
Mtr3g3081 340 Pfam WRKY DNA -binding domain 133 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr3g3081 340 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED 3 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3081 Mtr-Chr3 44715168 44717007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3081 3 248 WRKY Transcription Factor Family AT4G23810 37.778 1.48e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr3g3081 WRKY 1.8e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3081 - - gmx:100776906 399.053