Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3076 ATGGTTTTGTGCTGCTGTGACCATGCTGCAGGTGTAAAGGAACCTGTGAAGAAATCCAAGAAAAAAGAAGTATCTATGAAAGCAGAATCTTCTGCTAGTGATCAAGATAAAAAGAAAATAGTCTTTTTTGAGGATTGCAATCTTGCATTTGATCTAGAGGACCTTTTGAGAGCTTCTGCTCAGATTCTTGGAAAAGGTAATTTTGGTACAACATACAAGGCTGCTTTGGAGGATATAACCACTGTGGTGGTGAAGAGGTTGAAAGAGGTTACTGTTGGAAAAAGGGAGTTTGAACAGCAGATGGAAGTGGTAGGGAAAATTAAGCATGAAAATGTGGATGGATTAAGAGCTTATTATTATTCAAAGGATGATAAATTAGTAGTTTCTGATTATTATCAACAAGGCAGTGTTTCTTCCATCTTACATGGAAAAAGAAGGGAGCGAAGAACTCTAGACTGGGACAGCCGTTTAAGGATCGCAACTGGTACAGCAAGAGGCATTGCTCACATCCATACTCAACAAGGAGGGAAACTTGTTCATGGAAACATAAAAGCCTCAAACATCTTCCTCAACTCACAAGGGTATGGTTGTGTATCTGACATAGGTTTGGTAACTTTGATGAGTTCAATACCATCACAAGGAGCAAGAGCAACAGGATACCGTGCACCAGAAGTAATCGACACACGTAAAGCAACACATTCATCTGATGTATACAGTTTTGGTGTTCTACTACTTGAGCTTCTAACTGGGAAACCACCTGTATATTCTACAGAAGGTGAACAGGCTGTTCACTTGGTTAGATGGGTGAAATCTGTTGTCAGAGAGGAATGGACTGCAGAGGTTTTCGATACGGAGCTTTTGAGGTATTCAAGTATTGAGGAAGAAATGGTGGAGATGCTACAAATTGGGATGGCTTGTGCAGCAAGAATGCCAGACCAGAGACCAAAAATGGCTGAAGTTGTGAGAATGATGGAAGGGATTCGTCATGAAAATCGACCATCGTCTACCGAGTCTGGATCACAAGTTTCTACTCCAACTGTTTAA 1044 0.408 MVLCCCDHAAGVKEPVKKSKKKEVSMKAESSASDQDKKKIVFFEDCNLAFDLEDLLRASAQILGKGNFGTTYKAALEDITTVVVKRLKEVTVGKREFEQQMEVVGKIKHENVDGLRAYYYSKDDKLVVSDYYQQGSVSSILHGKRRERRTLDWDSRLRIATGTARGIAHIHTQQGGKLVHGNIKASNIFLNSQGYGCVSDIGLVTLMSSIPSQGARATGYRAPEVIDTRKATHSSDVYSFGVLLLELLTGKPPVYSTEGEQAVHLVRWVKSVVREEWTAEVFDTELLRYSSIEEEMVEMLQIGMACAARMPDQRPKMAEVVRMMEGIRHENRPSSTESGSQVSTPTV* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3076 347 Pfam Protein tyrosine and serine/threonine kinase 61 323 IPR001245 GO:0004672|GO:0006468
Mtr3g3076 347 ProSitePatterns Protein kinases ATP-binding region signature. 63 94 IPR017441 GO:0005524
Mtr3g3076 347 Gene3D Phosphorylase Kinase; domain 1 21 131 - -
Mtr3g3076 347 MobiDBLite consensus disorder prediction 327 347 - -
Mtr3g3076 347 MobiDBLite consensus disorder prediction 333 347 - -
Mtr3g3076 347 SUPERFAMILY Protein kinase-like (PK-like) 61 325 IPR011009 -
Mtr3g3076 347 ProSiteProfiles Protein kinase domain profile. 57 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3076 347 PANTHER OS05G0588300 PROTEIN 3 337 - -
Mtr3g3076 347 Gene3D Transferase(Phosphotransferase) domain 1 132 344 - -
Mtr3g3076 347 PANTHER INACTIVE RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3076 Mtr-Chr3 44613037 44615106 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3076 11 346 Receptor kinase-like Gene Family AT4G23740 59.538 1.67e-147 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr3g3076 PK_Tyr_Ser-Thr 4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3076 - - mtr:MTR_3g090665 674.085