Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3075 ATGGACAAGAAACTATTTCTCTTGTTCATATTTTCAGCAGTATTGGTTTGTATTGAAGCTGAACCATTGGAAGATAAACAAGCTTTACTTGATTTCCTTCACAACATAAACCACTCTCCACACTTCAATTGGGATGAGAATTCTTCTGTATGCCAAACATGGAGAGGGGTTACCTGCAACACCGATGGATCACGAGTTATCGCAATTCGATTACCTGGAGCCGGGTTAAGCGGTCCAATCCCACCAAACACTCTCAATCGTCTTTCGGCTCTCGAGACTGTTAGTCTTAGATCAAATGGTATCACTGGTGATTTCCCTGATGGTTTCTCTGAGCTGAAAAACTTGACTAGTCTTTATCTTCAATCTAACAAGTTTTCCGGACCATTACCATTGGATTTTTCTGTTTGGAGTAATCTATCTATTGTTAATTTTTCCAACAATTCTTTTAATGGTAGCATCCCTATTTCAATTTCAAATCTTACTCATCTCTATTCATTAGTCCTTGCTAATAACTCTCTTTCTGGTAAGATTCCTGATCTTAATATTCCAAGCCTAAAAGAGATGAATTTAGCAAACAATAATCTTAGTGGTGTTGTGCCTAAATCACTTCTTAGATTTCCAAGTTGGGTTTTTTCTGGTAACAACCTTACATCAGAAAATAGTACACTTTCTCCGGCTTTTCCTATGCATCCACCTTATACTCTTCCACCAAAGAAAACCAAAGGACTCAGCAAAACTGCATTATTGGGAATCATCATTGGTGTTTGTGCACTTGGATTTGCAGTGATAGCAGTTGTCATGATTTTGTGCTGCTATGACTATGCTGCTGCAGGTGTAAAAGAATCTGTGAAATCCAAGAAAAAAGATGTATCTATGAAAGCCGAATCTTCTGCAAGTCGAGATAAAAACAAGATAGTCTTTTTTGAGGATTGTAATCTTGCATTTGATTTAGAGGATCTTTTGAGAGCTTCAGCTGAGATTCTTGGAAGGGGTACTTTTGGTACAACATATAAGGCTGCTATAGAGGATGCGACCACGGTGGCAGTGAAGAGGTTGAAAGAGGTTACTGTTGGGAAAAGGGAATTTGAACAGCAGATGGAACTGATTGGGAAAATTAAGCATGAAAATGTGGATGCATTAAGAGCTTACTATTATTCAAAGGATGAGAAACTAGTTGTATCTGATTATTATCAACAAGGCAGTGTTTCTTCCATCTTACATGGCAACAGAGGGGAAAGAAGAACTCCTGTAGACTGGGATAGCCGTTTAAGGATCGCAATTGGTGCAGCAAGAGGCATTGCTCACATCCATACTCAACAAGGAGGGAAACTTGTTCATGGAAACATAAAAGCCTCAAACATCTTCCTCAATTCACACGGATATGGCTGTGTATCTGACACGGGCTTAGCAGTATTGATGAGTTCAGTACCTTCACCCGGAACAAGAGCATCAGGATACCGTGCGCCAGAAGTAACCGACACACGTAAAGCAGTGCATTCGTCGGATGTATACAGTTTTGGTGTCCTGTTACTTGAGCTTCTAACTGGGAAATCTCCCATATACTCTTTAGAAGGTGAACAAAATATACACTTGGTTAGATGGGTGAATTCTGTGGTCAGAGAGGAATGGACCGCAGAGGTTTTCGATGTGGAGCTTTTGAGGTATTCAAATATTGAGGAAGAAATGGTGGAGATGCTACAAATTGGGATGGCTTGTGCAGCAAGAATGCCGGATCAGAGACCGAAAATGTCTGAAGTTGTGAGAATGGTGGAAGGGATTCGTCCCGAAAATCGACCATCGTCTACTGAGTCTAGATCAGAAGTTTCTACTCCAACTGTTTATGCAACTTAA 1851 0.4019 MDKKLFLLFIFSAVLVCIEAEPLEDKQALLDFLHNINHSPHFNWDENSSVCQTWRGVTCNTDGSRVIAIRLPGAGLSGPIPPNTLNRLSALETVSLRSNGITGDFPDGFSELKNLTSLYLQSNKFSGPLPLDFSVWSNLSIVNFSNNSFNGSIPISISNLTHLYSLVLANNSLSGKIPDLNIPSLKEMNLANNNLSGVVPKSLLRFPSWVFSGNNLTSENSTLSPAFPMHPPYTLPPKKTKGLSKTALLGIIIGVCALGFAVIAVVMILCCYDYAAAGVKESVKSKKKDVSMKAESSASRDKNKIVFFEDCNLAFDLEDLLRASAEILGRGTFGTTYKAAIEDATTVAVKRLKEVTVGKREFEQQMELIGKIKHENVDALRAYYYSKDEKLVVSDYYQQGSVSSILHGNRGERRTPVDWDSRLRIAIGAARGIAHIHTQQGGKLVHGNIKASNIFLNSHGYGCVSDTGLAVLMSSVPSPGTRASGYRAPEVTDTRKAVHSSDVYSFGVLLLELLTGKSPIYSLEGEQNIHLVRWVNSVVREEWTAEVFDVELLRYSNIEEEMVEMLQIGMACAARMPDQRPKMSEVVRMVEGIRPENRPSSTESRSEVSTPTVYAT* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3075 616 Pfam Leucine rich repeat 80 125 IPR001611 GO:0005515
Mtr3g3075 616 ProSitePatterns Protein kinases ATP-binding region signature. 328 359 IPR017441 GO:0005524
Mtr3g3075 616 PANTHER OS05G0588300 PROTEIN 7 615 - -
Mtr3g3075 616 ProSiteProfiles Protein kinase domain profile. 322 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3075 616 PANTHER LRR RECEPTOR-LIKE KINASE 7 615 - -
Mtr3g3075 616 Gene3D Transferase(Phosphotransferase) domain 1 397 613 - -
Mtr3g3075 616 SUPERFAMILY L domain-like 36 217 - -
Mtr3g3075 616 Gene3D Ribonuclease Inhibitor 23 230 IPR032675 -
Mtr3g3075 616 SUPERFAMILY Protein kinase-like (PK-like) 326 591 IPR011009 -
Mtr3g3075 616 MobiDBLite consensus disorder prediction 597 616 - -
Mtr3g3075 616 MobiDBLite consensus disorder prediction 591 616 - -
Mtr3g3075 616 Pfam Leucine rich repeat N-terminal domain 24 60 IPR013210 -
Mtr3g3075 616 Gene3D Phosphorylase Kinase; domain 1 286 396 - -
Mtr3g3075 616 Pfam Protein tyrosine and serine/threonine kinase 326 588 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3075 Mtr-Chr3 44607507 44611274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3075 20 612 Receptor kinase-like Gene Family AT4G23740 58.469 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr3g3075 PK_Tyr_Ser-Thr 3.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3075 - - gmx:100813065 929.087