Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3067 ATGTCAAACAATGCATTAAATTTTCTTATCTTGTTTCTCACTATCTCCTTGTTTCCATTCATTTCTTCTCTAAACCAAGAAGGTCTCTCTCTACTTTCATGGCTTTCAACTTTCAACTCCTCAAATTCTGTCCCTACCACTACTTTCTCATCATGGGATCCAACTCACAAAAATCCTTGCAGATGGGATTATATAAAATGTTCTGCAGCAGAGTTTGTTGAAGAGATCGTAATAACATCGATCGATCTTCATAGCGGATTCCCTACACAGTTTCTTTCTTTTAACCACCTTACAACTCTTGTCATCTCAAATGGAAATCTCACAGGTGAGATTCCAAGTTCAGTTGGAAACTTGTCATCTCTAGTTACTCTTGATCTTAGCTACAATACTTTAACAGGAACTATACCAAAAGAAATAGGAAAGTTATCTGAGCTGAGATGGTTATCTTTGAATTCGAATTCGTTACACGGTGGAATTCCAACCACAATTGGCAACTGTTCAAAGCTTCAGCAGCTAGCACTGTTTGACAATCAGCTTTCTGGTATGATTCCGGGAGAGATAGGACAACTGAAGGCTCTTGAATCGCTGCGAGCCGGCGGAAACCAAGGTATTTTCGGCGAAATTCCAATGCAGATATCAGATTGTAAGGCTTTAGTTTTTCTTGGACTTGCAGTTACTGGAATTTCTGGTGAGATTCCAGCAAGCATAGGGGAGCTTCAAAATCTCAAGACGCTTTCAGTCTACACAGCTCATCTCACAGGTCAAATTCCACTGGAGATTCAAAACTGTTCTTCTTTGGAAGATTTGTTTCTGTATGAAAATCACCTTTCTGGAAACATTCTATATGAATTAGGTTCCATGCAAAGCCTCAAGAGAGTGTTGCTGTGGCAGAACAATTTCACTGGAACCATTCCAGAAAGTCTTGGAAACTGTACAAATCTAAAGGTTATTGATTTTTCTTTGAATTCTCTGGTTGGTCAGTTACCTTTGTCTCTCAGTAATCTACTCTCATTGGAGGAACTTCTTGTGTCTGATAATAACATTTATGGAGAAATACCTTCATATATTGGAAATTTTTCCATGCTGAATCAACTTGAATTAGATAATAACAAATTCACTGGAGAGATTCCACGTGTTATGGGGAACTTGAAGGAACTCACTCTCTTCTATGCTTGGCAGAATCAACTTCATGGAAGTATACCAACAGAATTATCTAACTGTGAGAAACTTGAAGCAGTTGATCTTTCACACAACTTCCTCACTGGTCCAATTCCAAATTCTCTCTTTCATCTACAGAATTTAACTCAGTTGTTGCTGATATCAAACAGGCTTTCAGGCCAAATTCCACCGGATATCGGCAGGTGCACCAGCTTGATCAGGTTAAGACTTGGATCAAACAACTTTACTGGTCAAATTCCCCAAGAAATAGGCCTTTTAAGAAGTTTGAGCTTTCTAGAGTTGTCAGATAATAACCTTAGTGAAAATATTCCTTATGAGATAGGTAACTGTGCTCATTTAGAAATGCTTGACTTGCATAAAAATGAGCTTCAAGGAACCATTCCTTCCTCATTAAAGTTATTAGTTGATCTTAATGTGTTGGATCTTTCTTCAAACAGAATCACCGGAAGCATTCCCAAGAGTTTTGGTGAGCTTACATCGCTAAATAAGTTGATTTTAAGTGGAAACCTTATCACCGGTTTGATCCCTCAGTCATTGGGGCTATGCAAGGATTTGCAGTTGTTGGATTTTAGTAACAATAAGCTCATAGGTTCTATTCCCAATGAGATTGGTTACTTGCAAGGATTGGATATTCTTTTGAACTTGAGTTGGAATTCTCTTACTGGTCCCATTCCAAAGACTTTTTCAAATCTCTCAAAACTTTCAATCTTGGACCTATCTTACAACAAGCTCACAGGTACTCTCATAGTACTTGGTAATCTTGACAATCTTGTGTCTCTAAATGTTTCTTACAATAGATTTTCTGGTACTCTTCCTGACACAAAATTCTTCCAAGATCTACCTTCTGCTGCATTTGCCGGTAACCCTGACCTTTGCATTAACAAGTGTCATACAAGTGGAAATCTCCAAGGAAACAAGTCAATAAGAAATATTATTATCTACACTTTCCTTGGTATTATCTTAACTTCTGCTGTTGTCACTTGTGGAGTTATTTTAGCATTAAGGATTCAAGGGGACAATTATTATGGGAGCAATAGTTTTGAGGAAGTGGAAATGGAATGGTCTTTCACTCCATTCCAAAAGCTTAATTTCAACATCAATGACATTGTCACGAAGTTGTCGGATTCAAACATAGTCGGAAAGGGCGTCTCGGGCGTTGTTTATCGTGTAGAGACTCCAACAAAACAGCTTATTGCAGTTAAGAAGCTATGGCCAGTAAAGAATGAAGAACCACCTGAGAGAGATTTGTTTACAGCAGAAGTTCAGACGCTTGGATCGATACGGCATAAGAATATAGTGAGACTTTTAGGATGCTGTGACAACGGAAGAACTAAAATGCTCTTGTTTGATTACATATGCAATGGTAGTTTGTTTGGATTGCTCCATGAAAAGAGAATGTTCTTGGATTGGGATGCAAGGTATAAGATCATACTTGGAACAGCTCATGGTTTAGAATATCTTCATCATGACTGTATCCCTCCAATCGTCCATCGCGACGTTAAGGCTAACAACATCTTGGTAGGTCAACAGTTTGAAGCTTTTCTTGCAGATTTTGGCCTTGCAAAATTGGTCATTTCCTCAGAGTGTGCAAGAGCCTCGCACGTAGTTGCAGGTTCATATGGATACATAGCTCCTGAATATGGATACAGTTTAAGGATCACAGAGAAGAGTGATGTGTACAGCTATGGTGTTGTGCTCCTTGAGATGTTAACTGGAATGGAACCAACTGATAACAGGATTCCAGAGGGTGCTCACATTGTAACATGGGTTATCAGCGAAATCAGAGAGAAGAAAAAAGAATTCACATCTATTATTGATCAGCAATTATTATTACAGTGTGGAACAAAAACACCAGAGATGCTTCAAGTGCTAGGTGTAGCTCTTCTCTGTGTGAATCCATCACCAGAAGAAAGACCTACGATGAAAGATGTAACAGCAATGCTCAAAGAGATTAGGCATGAAAATGATGATTTGGATAAACCAAATAAAGGCATGGTTATTACCAATCCAAAAGCAGCAGTTCATTGTTCCAGTTTCTCAAGATCATGTGAACTTTTGATAGAATCATCATCATCTTCATAG 3261 0.3845 MSNNALNFLILFLTISLFPFISSLNQEGLSLLSWLSTFNSSNSVPTTTFSSWDPTHKNPCRWDYIKCSAAEFVEEIVITSIDLHSGFPTQFLSFNHLTTLVISNGNLTGEIPSSVGNLSSLVTLDLSYNTLTGTIPKEIGKLSELRWLSLNSNSLHGGIPTTIGNCSKLQQLALFDNQLSGMIPGEIGQLKALESLRAGGNQGIFGEIPMQISDCKALVFLGLAVTGISGEIPASIGELQNLKTLSVYTAHLTGQIPLEIQNCSSLEDLFLYENHLSGNILYELGSMQSLKRVLLWQNNFTGTIPESLGNCTNLKVIDFSLNSLVGQLPLSLSNLLSLEELLVSDNNIYGEIPSYIGNFSMLNQLELDNNKFTGEIPRVMGNLKELTLFYAWQNQLHGSIPTELSNCEKLEAVDLSHNFLTGPIPNSLFHLQNLTQLLLISNRLSGQIPPDIGRCTSLIRLRLGSNNFTGQIPQEIGLLRSLSFLELSDNNLSENIPYEIGNCAHLEMLDLHKNELQGTIPSSLKLLVDLNVLDLSSNRITGSIPKSFGELTSLNKLILSGNLITGLIPQSLGLCKDLQLLDFSNNKLIGSIPNEIGYLQGLDILLNLSWNSLTGPIPKTFSNLSKLSILDLSYNKLTGTLIVLGNLDNLVSLNVSYNRFSGTLPDTKFFQDLPSAAFAGNPDLCINKCHTSGNLQGNKSIRNIIIYTFLGIILTSAVVTCGVILALRIQGDNYYGSNSFEEVEMEWSFTPFQKLNFNINDIVTKLSDSNIVGKGVSGVVYRVETPTKQLIAVKKLWPVKNEEPPERDLFTAEVQTLGSIRHKNIVRLLGCCDNGRTKMLLFDYICNGSLFGLLHEKRMFLDWDARYKIILGTAHGLEYLHHDCIPPIVHRDVKANNILVGQQFEAFLADFGLAKLVISSECARASHVVAGSYGYIAPEYGYSLRITEKSDVYSYGVVLLEMLTGMEPTDNRIPEGAHIVTWVISEIREKKKEFTSIIDQQLLLQCGTKTPEMLQVLGVALLCVNPSPEERPTMKDVTAMLKEIRHENDDLDKPNKGMVITNPKAAVHCSSFSRSCELLIESSSSS* 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3067 1086 ProSitePatterns Protein kinases ATP-binding region signature. 772 800 IPR017441 GO:0005524
Mtr3g3067 1086 ProSiteProfiles Protein kinase domain profile. 766 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3067 1086 SUPERFAMILY RNI-like 82 397 - -
Mtr3g3067 1086 Pfam Leucine rich repeat 96 155 IPR001611 GO:0005515
Mtr3g3067 1086 Pfam Leucine rich repeat 606 660 IPR001611 GO:0005515
Mtr3g3067 1086 Pfam Leucine rich repeat 505 564 IPR001611 GO:0005515
Mtr3g3067 1086 PANTHER LRR RECEPTOR-LIKE KINASE 3 1062 - -
Mtr3g3067 1086 PRINTS Leucine-rich repeat signature 121 134 - -
Mtr3g3067 1086 PRINTS Leucine-rich repeat signature 624 637 - -
Mtr3g3067 1086 Gene3D Ribonuclease Inhibitor 328 426 IPR032675 -
Mtr3g3067 1086 Gene3D Ribonuclease Inhibitor 231 327 IPR032675 -
Mtr3g3067 1086 SMART LRR_typ_2 142 166 IPR003591 -
Mtr3g3067 1086 SMART LRR_typ_2 647 680 IPR003591 -
Mtr3g3067 1086 SMART LRR_typ_2 527 550 IPR003591 -
Mtr3g3067 1086 SMART LRR_typ_2 551 574 IPR003591 -
Mtr3g3067 1086 SMART LRR_typ_2 479 503 IPR003591 -
Mtr3g3067 1086 SMART LRR_typ_2 287 311 IPR003591 -
Mtr3g3067 1086 SMART LRR_typ_2 431 455 IPR003591 -
Mtr3g3067 1086 SMART LRR_typ_2 335 359 IPR003591 -
Mtr3g3067 1086 SMART LRR_typ_2 118 141 IPR003591 -
Mtr3g3067 1086 Gene3D Ribonuclease Inhibitor 427 698 IPR032675 -
Mtr3g3067 1086 Gene3D Transferase(Phosphotransferase) domain 1 845 1063 - -
Mtr3g3067 1086 SMART serkin_6 766 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3067 1086 Pfam Leucine Rich Repeat 409 431 IPR001611 GO:0005515
Mtr3g3067 1086 SUPERFAMILY Protein kinase-like (PK-like) 763 1054 IPR011009 -
Mtr3g3067 1086 SUPERFAMILY RNI-like 323 665 - -
Mtr3g3067 1086 Pfam Protein kinase domain 769 1038 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3067 1086 Gene3D Ribonuclease Inhibitor 30 143 IPR032675 -
Mtr3g3067 1086 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 1062 - -
Mtr3g3067 1086 Pfam Leucine rich repeat N-terminal domain 25 68 IPR013210 -
Mtr3g3067 1086 Gene3D Phosphorylase Kinase; domain 1 735 844 - -
Mtr3g3067 1086 ProSitePatterns Serine/Threonine protein kinases active-site signature. 888 900 IPR008271 GO:0004672|GO:0006468
Mtr3g3067 1086 Gene3D Ribonuclease Inhibitor 144 230 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3067 Mtr-Chr3 44517421 44521539 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3067 23 1059 Receptor kinase-like Gene Family AT5G56040 47.383 0.0 907
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr3g3067 Pkinase 4.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3067 - - gmx:100807225 1737.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3067 3 44517421 44521539 Mtr3g3067 3 44517421 44521539 ECH