Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3057 ATGGTTAAGTCTTGGTTTTTTTGGGTGTTGATTGTGGTGGGTTATGGGTGCTTCCTTGAGACACCTATTAGGGTAGAAGGGTACCCAATTGAAGATTTCATTGTGAAGTTGCCAGGCCAACCTAAGGTTGAATTCAAACAATATGCTGGCTATATTGATATAGATGTAAGGCATGGGAGAAGCCTCTTCTATTATTTTGTTGAGGCTGATCATGACCCTCACAAAAAGCCTCTCACCCTTTGGCTCAATGGAGGTCCAGGATGTTCCTCAATTGGAGGAGGTGCCTTTACGGAATTGGGTCCATTTTATCCTACCGGTGATGGACGTGGTTTACGAAGAAATAAAAAATCTTGGAATAGAGCTTCCAATCTCCTCTTTGTGGAGTCTCCCGCTGGAGTTGGTTGGTCATACTCAAATACAACTTCTGATTATAACAACTATGATGACACCTCCACAGCTAATGATACACTTTTGTTCATGTTAAAATGGTACGAGAAGTTTCCTTCCTATAGATCAAGGGGTTTGTTTCTGACAGGAGAAAGCTATGCAGGGCATTTCATACCTCAGTTAGCTAACACTATTCTTGATTATAATGCTCATCATTCAACTGGTTTCAAATTCAATATAAAAGGAGTCGCTATTGGAAATCCACTTTTGCAATTCAGTCGTGATACGCAAGCAACATATGAATATTACTGGTCACATGGAATGATTTCCGATGAAATAGGCCTTACCATTATGAATGATTGCAATTTTGATGCATCTTATGATAACTTATCTAAATCATGTAAAGATGCCATGGTTGATGCTCAAGATATTGTGAGCGACTATATAGACAACTATGATGTGATTCTTGATGTTTGTTATCCATCCATAGCTGAACAAGAATTGAGATTGAAAAGAATGGCTACTAAAATAAGTTTAACTGTAGATATTTGTATGGACTCTGAAATTTATTTTTATCTTAACCTTCCGGAGGTTCAGAAGGCTCTCCATGCTAACCGTACCAATTTGCCCTATCCATGGTCTATGTGTAGTGGTGTTTTAAATTACAACGATGCAGATCACGATATCAATATACTTCCAGTTCTCAAACGGATAGTTCAAAACCATATTCCAGTATGGGTTTATAGTGGAGATCAAGATTCAATTGTGCCATTACTAGGTTCTCGAAGACACATTCGTGAACTAGCTCATGACCTGAATTTCAACATTACAGACTCATATAGAGTTTGGTTCCATAGAGACCAGGTTGGAGGTTGGGTAACTGAATATGGAAATTTATTGACTTTCGCCACCGTAAGAGGAGCAGGTCACATAGTACCTTATGCGCAACCTTCTAAAGCATTGCATCTATTCAGTTCCTTTGTACGTGGCAGAAGATTGCCAAAAACAACCCGACCTAAAATTATTGATGAAATTACGTATGAATAA 1434 0.3856 MVKSWFFWVLIVVGYGCFLETPIRVEGYPIEDFIVKLPGQPKVEFKQYAGYIDIDVRHGRSLFYYFVEADHDPHKKPLTLWLNGGPGCSSIGGGAFTELGPFYPTGDGRGLRRNKKSWNRASNLLFVESPAGVGWSYSNTTSDYNNYDDTSTANDTLLFMLKWYEKFPSYRSRGLFLTGESYAGHFIPQLANTILDYNAHHSTGFKFNIKGVAIGNPLLQFSRDTQATYEYYWSHGMISDEIGLTIMNDCNFDASYDNLSKSCKDAMVDAQDIVSDYIDNYDVILDVCYPSIAEQELRLKRMATKISLTVDICMDSEIYFYLNLPEVQKALHANRTNLPYPWSMCSGVLNYNDADHDINILPVLKRIVQNHIPVWVYSGDQDSIVPLLGSRRHIRELAHDLNFNITDSYRVWFHRDQVGGWVTEYGNLLTFATVRGAGHIVPYAQPSKALHLFSSFVRGRRLPKTTRPKIIDEITYE* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3057 477 ProSitePatterns Serine carboxypeptidases, serine active site. 177 184 IPR018202 GO:0004185
Mtr3g3057 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Mtr3g3057 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Mtr3g3057 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Mtr3g3057 477 PRINTS Carboxypeptidase C serine protease (S10) family signature 429 442 IPR001563 GO:0004185|GO:0006508
Mtr3g3057 477 Pfam Serine carboxypeptidase 39 459 IPR001563 GO:0004185|GO:0006508
Mtr3g3057 477 ProSitePatterns Serine carboxypeptidases, histidine active site. 429 446 IPR033124 GO:0004185
Mtr3g3057 477 SUPERFAMILY alpha/beta-Hydrolases 23 465 IPR029058 -
Mtr3g3057 477 Gene3D - 360 459 - -
Mtr3g3057 477 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Mtr3g3057 477 PANTHER CARBOXYPEPTIDASE 7 467 - -
Mtr3g3057 477 Gene3D - 313 349 - -
Mtr3g3057 477 Gene3D alpha/beta hydrolase 30 289 IPR029058 -
Mtr3g3057 477 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 7 467 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3057 Mtr-Chr3 44423939 44428449 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3057 320 462 Calmodulin-binding Proteins AT2G22960 29.371 1.99e-14 69.7