Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3045 ATGGATGGTAATGTTCCTGAAGAAGCCACACAGTCAACAAATGTGGAAATATCTGAAGAAGATATTTTAGTTGCTGCTCCTAATATTGGTGTGGAATTAAATAGTGAACCTTGTAAGGGGATGGAATTCAAATCTGTGGAAAAGGTTAGAGAATTTTATAATTCATTTGCAAAAAGGATGGGTTTTGGAGTACGTGTTCGCTCAACTAAACCAAAGAGAGCTGTCTTTGTATGTTGTAATGAAGGTCATCATATAGTGAAAAGTTCAACAAACAAAGAAATCCAAGATGGCACAAATCAAACTAAAAGAAAGTGTTCTACTTCTCGAACTGGTTGTCTAGCCACACTTGTTGTTAAAAGAGGTACATTAGAAGGAAATTGGATTATATGTTCATTTAAGAATGATCATAACCATCCCATGGTTAGCCCTAAAAGTGTGTCTTATATGCGGTGTCATAAAAGCATGAATGGTGCTGCAAAAAGTCTTGTTGAACATTTTAAGGAAGAAGGTATACCGACAGGAAAGGTTGCTACAATGTTCAGTGAAGGGGACTTGGCTTTCTCTAATAGGGATTGTTGGAATCATGTTAGAAGTCTTCGAAGAAAAAATTTAGACGTTGGAGATGCTCAAGCTGTTTTTAATTATTGTAAACAGAAACAGGTAGAAAATTCAAACTTTTTCTATGAAATCCAATGTGATGAAGATTCTCGGATGATAAACTTTTTTTGGGTTGATGCTAGATCAAGATTAGCTTACCAACAATTTGGAGATGTAATATCTTTTGACACCACATATAAGACTAACAAGTATAGTATGCCATTTGCCCCGTTTGTTGGATTGAATAATCATTATCAATCAATTTTATTTGGTTGTGCTTTACTACAAGATGAGTCAGAACGCTCGTTTATATGGTTGTTTGAAACTTTTCTTAAGGCAATGGATGGTAAAAAGCCCAAATCTGTCATAACTGACCAGGATTTGGCTATGAAAGGTGCTTTAGCCAATGTTTTTCCAGAAACTAGACATCGCCTCTGCTTATGGCATATTAGGAAAAAATTTGCTGAAAAGTTAGCTCATGTTTATCATAAAAATTCCACTTTCAAGCGAGAATTGAAAAAATGCATTCATGTTTCACCAAGTATAGAAAGTTTTGAAGAAGACTGGAGCCGATTAATGATTGAGTACGGACTAGACAACAATGAATGGCTTCAAGGGTTATATAAAATTAGAGAATCTTGGATACCAGTTTATAATAGAAGCTGTTTTTTTGCTGGGATGAATACAAGTCAAAGAAGTGAGAGCATCAATGCGTTTTTTGATTCTTTTGTGAATGCATCAACAACATTGCAAGAATTTGTGTTGAAATTTGAAAAGGCGGTTGATAGCCGCTTAGAAGTAGAAAAAAGAGAGGATTATGAAAGTAGGCATAAAAAACGCATTTTGGCTACAGGGTCAAAACTTGAGGAGCATGCTGCGTCTATTTATTCGAGAAACATTTTTGGTAAATTTCAAGATGAGATCAGGAAGATCTACAAATTTTAA 1542 0.3489 MDGNVPEEATQSTNVEISEEDILVAAPNIGVELNSEPCKGMEFKSVEKVREFYNSFAKRMGFGVRVRSTKPKRAVFVCCNEGHHIVKSSTNKEIQDGTNQTKRKCSTSRTGCLATLVVKRGTLEGNWIICSFKNDHNHPMVSPKSVSYMRCHKSMNGAAKSLVEHFKEEGIPTGKVATMFSEGDLAFSNRDCWNHVRSLRRKNLDVGDAQAVFNYCKQKQVENSNFFYEIQCDEDSRMINFFWVDARSRLAYQQFGDVISFDTTYKTNKYSMPFAPFVGLNNHYQSILFGCALLQDESERSFIWLFETFLKAMDGKKPKSVITDQDLAMKGALANVFPETRHRLCLWHIRKKFAEKLAHVYHKNSTFKRELKKCIHVSPSIESFEEDWSRLMIEYGLDNNEWLQGLYKIRESWIPVYNRSCFFAGMNTSQRSESINAFFDSFVNASTTLQEFVLKFEKAVDSRLEVEKREDYESRHKKRILATGSKLEEHAASIYSRNIFGKFQDEIRKIYKF* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3045 513 Pfam FAR1 DNA-binding domain 51 141 IPR004330 -
Mtr3g3045 513 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 31 508 IPR031052 GO:0006355
Mtr3g3045 513 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 31 508 - -
Mtr3g3045 513 Pfam MULE transposase domain 258 352 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3045 Mtr-Chr3 44325569 44327110 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr3g3045 MULE 2.3e-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3045 - - qlo:115970754 642.884