Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3040 ATGGTTGTATGTATCCGTAAGCTCTTTGTTCTCCCACTTTTGAATCTGATATACGAATTTATGAAATTAATGTGTTTTCTTATGCATATTAAGGTTGTGATATTTGTACTTCAGATGCTTTTGTTTGTTGCAACGCCAATTACATTTATTTTGGGAAGGGAAACATTCCAAACTATGTCATATACAGATACATTGAGCATTATCCGACTCAAAAATCGTGTTTTGAGTATCCTAATTTTGAAGATGGATGCACCAATTTACTTTGCCACTGTAAGATATTTAAGGGAAAGGATCTCATGGTGGATTGATGAAAAGGGAAACAAGTTTGAAGTATGTTATAATGAATCTGAATGGTATGCATAA 363 0.3278 MVVCIRKLFVLPLLNLIYEFMKLMCFLMHIKVVIFVLQMLLFVATPITFILGRETFQTMSYTDTLSIIRLKNRVLSILILKMDAPIYFATVRYLRERISWWIDEKGNKFEVCYNESEWYA* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3040 120 Gene3D STAS domain 56 113 IPR036513 -
Mtr3g3040 120 PANTHER SULFATE TRANSPORTER 28 110 IPR001902 GO:0015301|GO:0016020|GO:0055085
Mtr3g3040 120 PANTHER SLC26A/SULP TRANSPORTER-RELATED 28 110 - -
Mtr3g3040 120 Pfam STAS domain 75 106 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3040 Mtr-Chr3 44270197 44270992 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3040 30 119 Inorganic Solute Cotransporters AT4G02700 35.106 1.53e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3040 K17471 - mtr:MTR_4g063825 116.316