Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3038 ATGGTACCACCAGGACCAGGGCCACCAACTCCTATTGGCGGTGCTCAGTCTCTTTCACCTTCTCTAATGAGATCAAATTCAGGAATGTTAGGAGCTCAAGGGGCTCCAATGTCTTCGCTTGTGTCTCCTCGTACTCAATTCAACAACATGAACATTCTAGGAAATATGTCCAATATAACTTCTATGCTGAATCAATCTTTCCCAAATGGAGTTCCAAACCATGGGCTTACTGGTCCAGGAAGTAGCCAGCGTGGAGGAATTGAAACTGGAAGTGAAATAGGCCAACTTTCCAGTGTTGGCAATGGAACAAGCTTCCCTAATTCTCCATCCTCATTTGGACAATCAAATATGACGAGTGCGGGTTCCTCTGGTCAAGTTCAGGGTCAACAATTTTCCAACTCTTCTACAAACCAACTGTTGCCAGATCATCAGCATTCTCAACCGCTTGATACTCAAAATTTCCAACACAGCCAGCAGTCAATGCAACAGTTCTCTTCTCCTCTGAATACGCAGCAGCAACAGCATTTTCAATCAATGCGAGGAATAGGTGGAATGGGACCAGTGAAGTTAGAGCCCCAGCTAAATAATGACCAACTTGGACAGCAGCAGCTGCAATCAATGAGGAATCTTCCTCCTGTGAAATTAGAACAGCAACAAATTCAAACAATGAGATCTCTGGCACCAGTTAAAATGGAGCCCCAACATTGTGATCAGCCGTTATTTTTGCAGCAGCAACAGCAGCATCAACAACAACAACAGTTCCTCCACATGTCGAGACAATCTTCTCAGGCTACTGCTGCTCAGATCAATCTTTTGAACCATCACAGGCTTTTACAGCTACAGCAACACCAGCAGCAGCAGCAACAACTCTTAAAGGCAATGCCTCAGCAACGGTCTCAATTACCACAGCAATTTCAACAGCAGAATATGCCTATGAGGTCTCCTGTGAAACCGGCATATGAACCAGGGATGTGTGCGAGGCGGCTGACACACTACATGTATCAGCAACAACATAGACCTGAAGATAACAACATCGAGTTTTGGAGGAAGTTTGTTGCTGAGTATTATGCTCCTAATGCCAAGAAGAAATGGTGTGTTTCGATGTATGGAAGTAGCAGACAAACAACTGGAGTTTTCCCTCAGGATGTATGGCACTGCGAAATATGTAATCGGAAACCAGGCCGTGGGTTTGAAGCAACCGTTGAGGTTCTTCCTAGGCTTTTCAAGATAAAGTATGAAAGTGGCACTCTGGAAGAGCTACTTTATGTTGACATGCCCCGTGAATATCATAATTCCTCTGGCCAGATTGTTCTAGACTATGCAAAAGCAATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGACGGTCAACTTCGAATAGTTTTCTCTCCAGACCTGAAGATATGCTCTTGGGAATTTTGTGCTCGGCGCCATGAAGAGCTCATCCCCAGAAGATTGTTAATACCTCAGGTTAGTCAGATTGGAGCGGTTGCCCAGAAATACCAGGCTTTAACTCAAAATGCAACACCCAATGCATCTGCTCCAGAGTTACAAAATAATTGCAATATGTTTGTTGCATCAGCCCGTCAATTGGCCAAAGCCCTAGAAGTTCCATTGGTTAATGATTTAGGATATACAAAGAGATATGTGCGCTGCCTACAGATATCAGAAGTGGTAAATAGCATGAAAGACTTGATAGATTACAGTAGAGAAACTGGGACTGGACCTATGGAGAGCTTAGCTAAATTCCCTCGGAGAACAGTTAATTCCTGTGGAGTTCGTAATCAAGCTCAACAGCATGAAGATCAATTAAAACAACAGCAGCAGCAACAAATGATGGTCCATAACTCAAATGGCGATCAAAACCCAGTGCAAGCTGCTTCCATGCAAATTGCTTCCAGCAATGGTATGGTTAGTGTAAATAGTTCTGTCAACTCGGCGTCCGCATCAACAACCACAAGCACTATTGTTGGACTTCTCCACCAAAACTCTGTGAATTCTAGACAAAATTCAATGAACAATGCAAGCAGTCCATATGGAGGTAATTCTGTTCAGATTCCATCCCCTGGTTCCTCCAGTACTGTGCCACAGGCCCAGCCAAACTCATCCCCTTTTCAGTCACCACCTACACCATCCTCATCTAATAACCCCCCACAAACACCTCGATCCATTTTAACGCCTCCCAATCAAATGAATACAACAAATTCACCAGCTAATATTTCACTGCAACAAAATCAATATCAACCATCTCTTTCTGGTGATGCTGACCCAAGTGATGCTCAAAACTCAGTCCAGAAAATCATACATGAGATGATGATGTCATCCCAAATGAATGGTACTGGTGGAATGGCAGGTGCTGGTTCTATAGGAAATGACTTGAAGAATGTAAATGGTATTCTGCCAATGAGTGCAAATACAGGGCTCAACAATGGTAATGGCACAGTGAATAGTAATTCAGGTGTCGGTAATTATGGAACAGTGGGGTTCGTTCCATCCACTATGCCTAATGGAATCAGAGCTGCTATGGTAAACCATTCAGTCATGAACGGAAGGGGAGGAATGGCATCCATTGCTCGGGATCAAGCTATGAATCATCAACAGGATCTGTCAAACCAACTACTTAGTGGTCTAGGAGCAGTAAATGGTTTTAGTAATTTTCAATTTGATTGA 2676 0.4346 MVPPGPGPPTPIGGAQSLSPSLMRSNSGMLGAQGAPMSSLVSPRTQFNNMNILGNMSNITSMLNQSFPNGVPNHGLTGPGSSQRGGIETGSEIGQLSSVGNGTSFPNSPSSFGQSNMTSAGSSGQVQGQQFSNSSTNQLLPDHQHSQPLDTQNFQHSQQSMQQFSSPLNTQQQQHFQSMRGIGGMGPVKLEPQLNNDQLGQQQLQSMRNLPPVKLEQQQIQTMRSLAPVKMEPQHCDQPLFLQQQQQHQQQQQFLHMSRQSSQATAAQINLLNHHRLLQLQQHQQQQQQLLKAMPQQRSQLPQQFQQQNMPMRSPVKPAYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYYAPNAKKKWCVSMYGSSRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQIGAVAQKYQALTQNATPNASAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMESLAKFPRRTVNSCGVRNQAQQHEDQLKQQQQQQMMVHNSNGDQNPVQAASMQIASSNGMVSVNSSVNSASASTTTSTIVGLLHQNSVNSRQNSMNNASSPYGGNSVQIPSPGSSSTVPQAQPNSSPFQSPPTPSSSNNPPQTPRSILTPPNQMNTTNSPANISLQQNQYQPSLSGDADPSDAQNSVQKIIHEMMMSSQMNGTGGMAGAGSIGNDLKNVNGILPMSANTGLNNGNGTVNSNSGVGNYGTVGFVPSTMPNGIRAAMVNHSVMNGRGGMASIARDQAMNHQQDLSNQLLSGLGAVNGFSNFQFD* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3038 891 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 891 - -
Mtr3g3038 891 MobiDBLite consensus disorder prediction 1 37 - -
Mtr3g3038 891 MobiDBLite consensus disorder prediction 14 37 - -
Mtr3g3038 891 PANTHER LIM DOMAIN-BINDING PROTEIN 1 891 IPR029005 -
Mtr3g3038 891 MobiDBLite consensus disorder prediction 289 314 - -
Mtr3g3038 891 MobiDBLite consensus disorder prediction 669 703 - -
Mtr3g3038 891 MobiDBLite consensus disorder prediction 669 739 - -
Mtr3g3038 891 MobiDBLite consensus disorder prediction 65 179 - -
Mtr3g3038 891 MobiDBLite consensus disorder prediction 65 191 - -
Mtr3g3038 891 MobiDBLite consensus disorder prediction 595 624 - -
Mtr3g3038 891 MobiDBLite consensus disorder prediction 704 726 - -
Mtr3g3038 891 MobiDBLite consensus disorder prediction 289 313 - -
Mtr3g3038 891 Pfam LIM-domain binding protein 328 582 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3038 Mtr-Chr3 44231721 44239214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3038 8 891 C2H2 Transcription Factor Family AT1G43850 57.618 0.0 724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3038 3 44231721 44239214 Mtr3g3038 3 44231721 44239214 ECH