Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3023 ATGAACAAATTGATAAAGGAGGATTAGGAGAGAACTAAAACAAAAATACTCCATCCACGTTCACCATTTGTGGCAAAATGGAACGTAACATTCCTCTATGCTTGTCTCTTTGCTTTGTTTTTAGACCCTCTTTATTTCTATATTCCTATTACAGGAGACAAAGCGTGCATGGAAACAGATTTGGTTCTTGGTTTGTTAGTCACGTTCTCGCGAACCGTCGCAGATCTCTTCTTCTTGTTTCACATAATTCTTAAGTTCAGAACTGCCTTCAATTCTCCTACCTCTTTCGTTTATGGTCGCAAAGAACTTATCACTGATCCGGGTCAGATCGCCCGCCGATATATCAAGCATGATTTCATTATTGATCTTCTTGCCACCCTTCCTTTGCCTCAGGTTATCATTTGGGTTGTGATTCCAGCTACAAAGAACTCAAATGCAGCTCATGTAAACCACACATTGTCCCTAATAGTTCTCATTCAGTTCATTCCTAGATGTTTTCAGATTTTTCCTTTACAACGTCGAATCTTAAAGACTAGCGGCCTTATAGCCAAAACTGCTTTAGCAGGGGCATTGTACAATCTTGGTTTCTACATGCTGGCCAGCCATGTTTTAGGAGCAACATGGTATGTGTCATCTATTCAAAGACAATATGAGTGTTGGAGAATAATGTGCAAGAAGGAAATGAACAGAACACATTCTCCTTCTTGTGATCCTTCTTTTCTTGATTGTAGCACACTTGTTAATAATGAACGTCAAGTTTGGTTCAGACGCACTAGAGTCCTCACAGCTTGTGATGCATTCCAGGATAAAAATCACTTTCAGTTTGGAATGTTTGCTGATGCTTTTACTGATCACGTCTCTTCCTCAAGATTCTTCCAAAAATATTTTTATTGCCTCTGGTGGGGTTTGAAAAATCTAAGTTCATATGGACAAAATCTTAAGACTAGCACTTACAGTGGTGAAACATTATTTTCAAGTTTTATATGTATAGCAGGTCTTATACTGTTTGCACATCTCATTGGTAACATGCAGAATTATCTGCAATCTACAACTGCAAGACTTGAAGAGTGGAGACTTAAACAAAAAGATACAGAAGAATGGATGAATCATCGCCAACTTCCACCAGAACTACAAGAACGTGTTCGTCGCTTTGTTCAGTACAAATGGCTTGCTACTAGAGGTGTTGACGAAGAAGCCATTTTGAAATCCTTGCCTGTTGATCTTCGCCGCCAGATTCAGAGGCATCTCTGTCTTGACATTGTTCGCCGGGTACCATTTTTCGGCCAAATGGATGATCAGCTTCTAGATGCTATATGCGAACGTTTAGTATCATCATTGAACACAAAAGGCTCATACATAGTTAGAGAAGGTGATCCAGTGAAAGAGATGCTTTTTATCATCAGAGGAAGTATAGACAGTTCTACAACAGATGGTGGTAGATCAGGATTCTTCAATTCAATCACACTAAAACCAGGTGATTTTTGTGGTGAAGAATTGCTAACATGGGCTTTAATGCCAGCATCTAGTCTAAACCTTCCATCATCTACAAGAACTGTTAAGACACTAAGTGAAGTAGAAGCATTTGCACTTAGAGCAGAAGATCTCAAATTTGTGTCAAGCCAGTTTAAGCGTCTTCATAGCAAGAAACTGCAACATGCTTTCAGATACTACTCTCATCAGTGGAGAGCTTGGGGGGCATCTTTTATACAAGCTGCGTGGCGGCGTCATAGGAAGAGACAATTGGCAATGGAGTTGTTAGAGAAAGAGAATTTGTATTATGAAAATGTGATGGAGCTAGAGGATTATGAAGAGAGTGGTGGAGGAGAGAGTTCTATGGGATTGGAGGAGGATAATGCTAGTCATGGTTTTGGTGCTACATTTTTGGCTTCAAAATTTGCTGCAAACACTAAGAAAGGAGCAGTTAAAAAGGTGACAATGATCCCTGATAGTAGCAGTTTAAAGATGCCCAAGATGTTTAAGCCAACTATGCCTGATTTCTCAACATTTCATGAAGATTAA 2019 0.3947 MNKLIKED*ERTKTKILHPRSPFVAKWNVTFLYACLFALFLDPLYFYIPITGDKACMETDLVLGLLVTFSRTVADLFFLFHIILKFRTAFNSPTSFVYGRKELITDPGQIARRYIKHDFIIDLLATLPLPQVIIWVVIPATKNSNAAHVNHTLSLIVLIQFIPRCFQIFPLQRRILKTSGLIAKTALAGALYNLGFYMLASHVLGATWYVSSIQRQYECWRIMCKKEMNRTHSPSCDPSFLDCSTLVNNERQVWFRRTRVLTACDAFQDKNHFQFGMFADAFTDHVSSSRFFQKYFYCLWWGLKNLSSYGQNLKTSTYSGETLFSSFICIAGLILFAHLIGNMQNYLQSTTARLEEWRLKQKDTEEWMNHRQLPPELQERVRRFVQYKWLATRGVDEEAILKSLPVDLRRQIQRHLCLDIVRRVPFFGQMDDQLLDAICERLVSSLNTKGSYIVREGDPVKEMLFIIRGSIDSSTTDGGRSGFFNSITLKPGDFCGEELLTWALMPASSLNLPSSTRTVKTLSEVEAFALRAEDLKFVSSQFKRLHSKKLQHAFRYYSHQWRAWGASFIQAAWRRHRKRQLAMELLEKENLYYENVMELEDYEESGGGESSMGLEEDNASHGFGATFLASKFAANTKKGAVKKVTMIPDSSSLKMPKMFKPTMPDFSTFHED* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3023 671 ProSiteProfiles cAMP/cGMP binding motif profile. 425 499 IPR000595 -
Mtr3g3023 671 SUPERFAMILY cAMP-binding domain-like 354 550 IPR018490 -
Mtr3g3023 671 Gene3D Jelly Rolls 423 543 IPR014710 -
Mtr3g3023 671 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED 10 668 - -
Mtr3g3023 671 Pfam Ion transport protein 26 352 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mtr3g3023 671 Pfam Cyclic nucleotide-binding domain 448 535 IPR000595 -
Mtr3g3023 671 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 10 668 - -
Mtr3g3023 671 Gene3D - 54 349 - -
Mtr3g3023 671 Gene3D Helix hairpin bin 351 416 - -
Mtr3g3023 671 CDD CAP_ED 425 556 IPR000595 -
Mtr3g3023 671 SUPERFAMILY Voltage-gated potassium channels 17 347 - -
Mtr3g3023 671 SMART cnmp_10 425 553 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3023 Mtr-Chr3 44125246 44135535 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3023 10 665 Ion Channels AT3G48010 65.770 0.0 895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3023 K05391 - gmx:100783672 1137.87