Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3022 ATGGACAGTCCTCCTTCTCCTTCTTGCATCATTGTTGCTTGTGATGCCACAAGGGACCGCAATGAGCACGATATTAAGCTCGTCATCGATCATGTTCATGCCAAGGATATCATTCTCTCTTCCGGTGACAGGTTGCTTGTGCTATGCATCTTGCATAAGGTGTCCCACCCTATGGGATACCAGACATTAGCATGTCCCGAGTCTTTTGCTGGCACCAACTTTCGTGCAATGGAGGAAGAAGTCAGAAAAAAAGTGCATGTATATGCAAATGAGCTTTTATCATGTCTTGAAGATTTTGAAATCCAAGGGGTTACCATTGACATTCAAGTCACCGCAGGTTTTCCAATTAGACAGATTATCTTACAAGAGGTTAAAAACTATAATGCATCTTGGATTGTACTTGATAGATACCTTCGGCGCGACATGAGATTCCACCTTAACAAGATACCATGTAATGTAGCATTGGTTAAAGATGACTTGTCTGTGGATATATGGAGATCTCAAAATGCACATGACAAAATTGCAGAAACAAAACCTGTGTATTCTTTGTCCAAGTTTGTATCATTATCAGATTGTCATAGCATGCAAGACATTGAGCAGTCTATCATCTCTTGTAAAAGTTATCCAAATTCCTTAGCTTCTTCTGATAGCTCTGGTACTATTAAGAGCTATTCAATGCATTCATATGCCACCAGTTCATTACATTCTAGGTCTTCTTCTAAGCATGAAAAATCAGGTTATCCCTTTTGCATCCAGTTTGCACAAACTGATGAGAGCGAAGTGAACCTAAAACTTAGTGTCTACATACGATTTGGAGTAATTTGTATAAGCATCAAAGGAGAACATAGACATCTCATGACTTCTCAAATTGGCCAAAAGCAAAATCAATGTGTGTTTCTACCAAAATCTTCAGGTGCACCAATTCTATGTGTTGGTTGTGGAATAAGGACAGAGTTATCTATCAAGGAGTCAAATAGGTTCAGCTATTCTGAAATACAGCTTGCAACAAATGATTTTTCAAAGGATAACTTAATAGGTGAAGGTGGATATGGTCATGTATATAAGGGTGTTCTTAAAGATGGACAACAAATAGCTGCAAAAGTAAGGAAAGAAGAAAGTGCACAAGGGTTTTCTGAATTTCATTCTGAGGTTTATGTCTTGAGTTTTGCTAGACACAAGAATATAGTGATGCTGTTGGGGTATTGTTGCAAAGAAAATAAAAATATTCTCATATATGAATATATTTGCAATAAGTCTCTTCATTGGCATTTATTTGAAAATAGTGAAGCAGTTCTTGATTGGTCTCAAAGATATGGTATTGCACTTGGGATTGCAAAGGGATTGCGTTTTCTACATGAGGAATGTCGAGGTGGTCCTATTATTCATAGGGATATGAGACCAAGCAATATACTTCTCACTCATGATTTTGTTCCCATGGTAATAAAGTAG 1449 0.3761 MDSPPSPSCIIVACDATRDRNEHDIKLVIDHVHAKDIILSSGDRLLVLCILHKVSHPMGYQTLACPESFAGTNFRAMEEEVRKKVHVYANELLSCLEDFEIQGVTIDIQVTAGFPIRQIILQEVKNYNASWIVLDRYLRRDMRFHLNKIPCNVALVKDDLSVDIWRSQNAHDKIAETKPVYSLSKFVSLSDCHSMQDIEQSIISCKSYPNSLASSDSSGTIKSYSMHSYATSSLHSRSSSKHEKSGYPFCIQFAQTDESEVNLKLSVYIRFGVICISIKGEHRHLMTSQIGQKQNQCVFLPKSSGAPILCVGCGIRTELSIKESNRFSYSEIQLATNDFSKDNLIGEGGYGHVYKGVLKDGQQIAAKVRKEESAQGFSEFHSEVYVLSFARHKNIVMLLGYCCKENKNILIYEYICNKSLHWHLFENSEAVLDWSQRYGIALGIAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMVIK* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3022 482 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Mtr3g3022 482 Pfam Protein tyrosine and serine/threonine kinase 342 475 IPR001245 GO:0004672|GO:0006468
Mtr3g3022 482 Gene3D Phosphorylase Kinase; domain 1 313 414 - -
Mtr3g3022 482 CDD USP_Like 33 156 - -
Mtr3g3022 482 PANTHER RECEPTOR-LIKE KINASE 8 480 - -
Mtr3g3022 482 Gene3D Transferase(Phosphotransferase) domain 1 416 482 - -
Mtr3g3022 482 ProSiteProfiles Protein kinase domain profile. 339 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3022 482 PANTHER OS01G0253100 PROTEIN 8 480 IPR045271 GO:0004714|GO:0006468
Mtr3g3022 482 SUPERFAMILY Protein kinase-like (PK-like) 324 480 IPR011009 -
Mtr3g3022 482 ProSitePatterns Tyrosine protein kinases specific active-site signature. 460 472 IPR008266 GO:0004672|GO:0006468
Mtr3g3022 482 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 33 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3022 Mtr-Chr3 44122960 44125114 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3022 261 476 Trihelix Transcription Factor Family AT1G26150 38.197 3.86e-43 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mtr3g3022 PK_Tyr_Ser-Thr 2.6e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3022 - - vun:114163670 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3022 3 44122960 44125114 Mtr3g3022 3 44122960 44125114 ECH