Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3011 ATGACACATTTTCACCTCTCTCCCACTCGAAACAAGTTGGTAGCAGTTGGCTGTGATACATCTGGAATACTCGGAGTAATTGATTCTGAAGGAAACAACTACACCTCTGGATGTTTGGCTTGGTGCAACAGGCACGCTGATCTCGTTGCCAATGAGTCTTGTTCTGGTCCTGGTTGTTGCCAGATTTCGGTACCCCAAGGTCGTGTGTTAACGGAAGTATTCTATTTTCCTCTTAGCTCGTCGAGTCACTCAGCAGTATATGACTTCAATCCGTGTGGTTATGTTTTTATTGTTGAAAATGGAGACTACATTTTCGCAACCACAGACCTCCCCAAGCTAAAGAAGAAGAACTTTCCTGTGTTGTTGGACTGGGCAGTAGGAAACCAAACCTGTCAGCAAGCTCAGAAGGATCTTTCAAGTAAGTATGCTTGTAAGGCAGACAGAAGTATATGTTACGATGCAGAAACCATCAAATCTGGTTACCTTTGCAAATGCTTTGATGGATATAGGGGAAATCCTTACCTCATTCATGGTTGCGAAGATATTAATGAATGCACGGAGTCTAATGACTGTGTTCAAGAGGCAACATGCGACAATCTTCCTGGAAGCTACCATTGTTTATGCCCGAAAGGACATGAGGGAGACGGAAAGATGAATGGCACAAAATGCAATCCAAAATCAAGGAAAGATATCATCTATATCATTGCATTGAGTGTCTGCGTAGGCCTCGTAGCACTACTGGTTGGAAGCAATTATGCTTATTTGGCATTGAAACAAAGAAAGCTTGATAAACTTAAAGAACAATTTTTTCAACAAAATGGTGGCTTACTGTTGCAACAAAAGATAGGAAGGCATGAAAGGTCAACCGAAACACCCAGAGTGTTCACTATTGAGGAGCTAAATGAAGCAACTAACAATTTTGATGAAGGAAAGATTCTAGGCAAAGGTTCTCAGGGAACAGTTTACAAAGGAGTTTTACAAGATAAAAGTATTGTAGCAATAAAAAAGTCCAAAATCAATGACCAAAACCAGATTGAGCCATTCATCAATGAAGTGGTCGTTCTTTCTCAAATCAACCATAGAAATGTGGTAAGAATTTTGGGTTGTTGTTTAGAGACAGAAGTTCCATTGCTTGTTTATGAATTCATTCCCAATGGAACTGTTTACGATCATCTTCATGATCAAAACCAATCTATAAAGCTGACATGGAAAACAAGGTTAAGAATAGCAAAAGAAACTGCTGGAGTCCTGGCATACTTACATTCTGCTGCTTCTACTCCAATCATTCATAGAGATATAAAATCTACAAACATCCTCCTCGATGTCAATCTCATTGCAAAGGTTTCTGATTTTGGAGCATCAAAGATTGTTCCTCTTGATCACAGTCTGATAACCACTCTAGTGCAAGGGACATTGGGGTATCTCGACCCAGAATACTTGCAAACTAGCGTGTTAACGGAGAAGAGTGATGTCTACAGCTTTGGGGTTGTCCTAGCAGAGCTACTGACAGGAAAGAAAGCACTATGTTATAGCAGACCAGTGGTAGAAAGAAGCCTTGCGATGTACTTTGTTTCTTCAATGAAAGAAGATCGGTTAGTTCATATTCTGGACAGCAACATCGATGCGGGAAATGTTGAGCATCTAAAGGAAGTTGCCCTAATTGCAGAAAGGTGTTTAAGGGTGAACAGTGAGGAAAGACCATCCATGAAAGAAGTGGCAATGGAACTGGAAGGAATATTAGTTATTGAAGAGTAG 1755 0.4046 MTHFHLSPTRNKLVAVGCDTSGILGVIDSEGNNYTSGCLAWCNRHADLVANESCSGPGCCQISVPQGRVLTEVFYFPLSSSSHSAVYDFNPCGYVFIVENGDYIFATTDLPKLKKKNFPVLLDWAVGNQTCQQAQKDLSSKYACKADRSICYDAETIKSGYLCKCFDGYRGNPYLIHGCEDINECTESNDCVQEATCDNLPGSYHCLCPKGHEGDGKMNGTKCNPKSRKDIIYIIALSVCVGLVALLVGSNYAYLALKQRKLDKLKEQFFQQNGGLLLQQKIGRHERSTETPRVFTIEELNEATNNFDEGKILGKGSQGTVYKGVLQDKSIVAIKKSKINDQNQIEPFINEVVVLSQINHRNVVRILGCCLETEVPLLVYEFIPNGTVYDHLHDQNQSIKLTWKTRLRIAKETAGVLAYLHSAASTPIIHRDIKSTNILLDVNLIAKVSDFGASKIVPLDHSLITTLVQGTLGYLDPEYLQTSVLTEKSDVYSFGVVLAELLTGKKALCYSRPVVERSLAMYFVSSMKEDRLVHILDSNIDAGNVEHLKEVALIAERCLRVNSEERPSMKEVAMELEGILVIEE* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3011 584 ProSiteProfiles Protein kinase domain profile. 307 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3011 584 Gene3D Phosphorylase Kinase; domain 1 275 382 - -
Mtr3g3011 584 Gene3D Laminin 139 218 - -
Mtr3g3011 584 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 1 584 IPR045274 GO:0007166
Mtr3g3011 584 Pfam Protein kinase domain 308 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3011 584 Gene3D Transferase(Phosphotransferase) domain 1 383 583 - -
Mtr3g3011 584 SUPERFAMILY EGF/Laminin 181 216 - -
Mtr3g3011 584 ProSiteProfiles EGF-like domain profile. 181 224 IPR000742 -
Mtr3g3011 584 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 1 584 - -
Mtr3g3011 584 SMART egfca_6 181 224 IPR001881 GO:0005509
Mtr3g3011 584 CDD EGF_CA 181 215 - -
Mtr3g3011 584 ProSitePatterns Calcium-binding EGF-like domain signature. 181 206 IPR018097 GO:0005509
Mtr3g3011 584 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Mtr3g3011 584 SUPERFAMILY Protein kinase-like (PK-like) 288 576 IPR011009 -
Mtr3g3011 584 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 197 208 IPR000152 -
Mtr3g3011 584 CDD STKc_IRAK 313 579 - -
Mtr3g3011 584 Pfam Calcium-binding EGF domain 181 223 IPR001881 GO:0005509
Mtr3g3011 584 SMART serkin_6 307 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3011 584 SMART egf_5 130 180 IPR000742 -
Mtr3g3011 584 SMART egf_5 184 224 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3011 Mtr-Chr3 44046166 44048784 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3011 1 581 Receptor kinase-like Gene Family AT1G21230 48.904 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mtr3g3011 Pkinase 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3011 - - mtr:MTR_3g088780 866.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3011 3 44046166 44048784 Mtr3g3011 3 44046166 44048784 ECH
Mtr1g0819 1 9278487 9282748 Mtr3g3011 3 44046166 44048784 PCT