Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3010 ATGGTTGTGCACATAAAACAACTTCTACTGGTTACGGCTTTTGTTGTCCTTTATACGAAAGCAGAAACTCAACCAAACTGTCCAACAAAGTGTGGCAATGTCACTATTCCCTTCCCATTTGGAACCACCAAGGATTGTTCTCTAGACAACACCTTTCTCATCGATTGCAACAAAACATCTTCAACCTCAACAGAGGTACCATTCTTGCCACAGACTAATCAAAGTGTTCTAAACATCTCACTTAATGGTGAACTTCACGTTGCATGGCCAGTAGCCAGCTATTGCTATTCAAAAAATGGCACACAAGTAAACCAAACATTTCAGGAAATCAACGTGACACATTTTCACATCTCAACTCAAAACAAGTTTATAGCAGTTGGTTGTGACACGGTGGGAATACTCGCAGTCGGAGAAGCTGATTCTGAGGAAAAAACCTACGCCACAGGATGTGTGGCTTTCTGCAACAGGCTTGATGATATCGAAGCCAATCAACCTTGCTCTGGTATTGGTTGCTGTGAGAGTTCAATACCCCCAGGTCAGATGTTAACGCGAGTGGCCTATGGTTCTTCTGGAGGCGTATTTTACAATCAAAGTGACTCAAAAGTACATGACTTCAATCCATGTGGTTATTCTTTTTTGGTTGCAAATGGAAACTACAGCTTGACACGATCAGACCTCATGTTGATGAAGAAGGAGTTTCCTGTGTTGTTGGACTGGAAAGTAGGAAATCAAACATGCCTGCAAGCTCAGAAGAATCATTCCAATTATGCTTGTAAGGCCATTAAAAGTACATGTTACGAAACAGGAACCAACAAATCTGGTTACCTTTGCAGATGCTCTCATGGATATCGGGGAAATCCTTACCTCATTAATGGTTGCCAAGATGTTGATGAATGCAAGGAATCCAATTACTGTTTTGAGGGGGCGACATGCATCAATCTTCCTGGAAGCTACCATTGTTTATGCCCAAAAGGATATGAAGGAGACGGAAAAAGATGCAGTCCAAAATCCAGTACCAAATCAAGTAAAGAGATCATGTTAATCATTGCACTGAGTGTCAGTGTAAGCCTCGTAGCACTGCTGATTGGAAGCTTTTATGCATATTTGGCATTCAAGAAAAGAAAGTTCATTAAACTTAAAGAACATTTTTTCCAACAAAATGGTGGCATACTGTTACAACAACAGATATGGAGGCATGGAGGTTCAACTGAAATAGCTAAAGTCTTCAAAGTTGAGGAGCTAAAAGATGCAACCAACAACTTCGATGAAGGCACGATCCTAGGCCAAGGTGGTCAGGGAATTGTTTACAAAGGAGTTTTACAAGATAACAGAATTGTAGCAATAAAAAAGTCCAAAATAAGTGACCCGAACCAGATTGAGTCGTTCATCAATGAAGTGGTCATTCTTTCCCAAATCAATCATAGAAATGTGGTAAAGATTTTGGGTTGTTGTTTAGAGACAGAAGTTCCGTTACTTGTTTACGAATTTATTCCCAATGGTACTGTTTATGAGCATCTTCATGATGAAACCCAATCTATGAAGCTTACATGGAAAACAAGATTAAGAATAGCAAAGGAAGCTGCTGGTGTGCTGGCATATTTACACTCTGCTGCTTCTACACCAATCATACATAGAGATGTGAAATCTTCAAATATACTCCTAGATCATAATCTCACTGCAAAGGTTTCTGACTTTGGAGCTTCAAGGATTGTTCCTCTTGATCATAGTCAAATAAACACTCTAGTGCAGGGAACATTGGGGTATCTTGACCCAGAATACTTCCACACAAGCCAATTAACAGAGAAGAGTGATGTTTATAGTTTTGGAGTGGTCCTAGCAGAGCTACTAACGGGAAAGAAGGCACTATCTTTTGGCAGGCCAGAGGTAGATAGAAACCTTTCCGCATACTTTGTTTCTTCAATGAAACAGGGTCGGTTACTTCATATTTTGGACAAAAATATAGATGAGACAAATATTGAGCAACTTAAAGAGGTTGCCGATATTGCAGAACGGTGTTTAAGGGTGAAGGGAGAGGACAGACCAACTATGAAAGAAGTGGCAATGGAACTTGAGGGAATATTAGTTATTGAAGAGTTCCGTTGGGGAAGTGACTATTTGTCTTCAGAAGAGACTGAAAACTTGCTCAAAACAGCAGAATCCGTAAAAAATGTTCAAGATGGTATTGGTGGAAGTGATATTAATTCTTCTGGTTCATATAGCTTAAACCAGATTTCGATATCGATTGGTGGAAGATGA 2256 0.3985 MVVHIKQLLLVTAFVVLYTKAETQPNCPTKCGNVTIPFPFGTTKDCSLDNTFLIDCNKTSSTSTEVPFLPQTNQSVLNISLNGELHVAWPVASYCYSKNGTQVNQTFQEINVTHFHISTQNKFIAVGCDTVGILAVGEADSEEKTYATGCVAFCNRLDDIEANQPCSGIGCCESSIPPGQMLTRVAYGSSGGVFYNQSDSKVHDFNPCGYSFLVANGNYSLTRSDLMLMKKEFPVLLDWKVGNQTCLQAQKNHSNYACKAIKSTCYETGTNKSGYLCRCSHGYRGNPYLINGCQDVDECKESNYCFEGATCINLPGSYHCLCPKGYEGDGKRCSPKSSTKSSKEIMLIIALSVSVSLVALLIGSFYAYLAFKKRKFIKLKEHFFQQNGGILLQQQIWRHGGSTEIAKVFKVEELKDATNNFDEGTILGQGGQGIVYKGVLQDNRIVAIKKSKISDPNQIESFINEVVILSQINHRNVVKILGCCLETEVPLLVYEFIPNGTVYEHLHDETQSMKLTWKTRLRIAKEAAGVLAYLHSAASTPIIHRDVKSSNILLDHNLTAKVSDFGASRIVPLDHSQINTLVQGTLGYLDPEYFHTSQLTEKSDVYSFGVVLAELLTGKKALSFGRPEVDRNLSAYFVSSMKQGRLLHILDKNIDETNIEQLKEVADIAERCLRVKGEDRPTMKEVAMELEGILVIEEFRWGSDYLSSEETENLLKTAESVKNVQDGIGGSDINSSGSYSLNQISISIGGR* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3010 751 ProSitePatterns EGF-like domain signature 2. 320 333 IPR000742 -
Mtr3g3010 751 Pfam Wall-associated receptor kinase galacturonan-binding 27 83 IPR025287 GO:0030247
Mtr3g3010 751 Gene3D Transferase(Phosphotransferase) domain 1 497 702 - -
Mtr3g3010 751 ProSitePatterns Calcium-binding EGF-like domain signature. 295 320 IPR018097 GO:0005509
Mtr3g3010 751 Gene3D Phosphorylase Kinase; domain 1 397 496 - -
Mtr3g3010 751 SUPERFAMILY Protein kinase-like (PK-like) 405 690 IPR011009 -
Mtr3g3010 751 SUPERFAMILY EGF/Laminin 293 336 - -
Mtr3g3010 751 ProSiteProfiles Protein kinase domain profile. 421 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3010 751 ProSitePatterns Serine/Threonine protein kinases active-site signature. 542 554 IPR008271 GO:0004672|GO:0006468
Mtr3g3010 751 ProSiteProfiles EGF-like domain profile. 295 334 IPR000742 -
Mtr3g3010 751 CDD EGF_CA 295 333 - -
Mtr3g3010 751 CDD STKc_IRAK 427 693 - -
Mtr3g3010 751 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 12 723 IPR045274 GO:0007166
Mtr3g3010 751 SMART egfca_6 295 334 IPR001881 GO:0005509
Mtr3g3010 751 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 311 322 IPR000152 -
Mtr3g3010 751 Pfam Protein kinase domain 423 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3010 751 SMART serkin_6 421 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g3010 751 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 12 723 - -
Mtr3g3010 751 Pfam Calcium-binding EGF domain 295 333 IPR001881 GO:0005509
Mtr3g3010 751 Gene3D Laminin 243 334 - -
Mtr3g3010 751 SMART egf_5 245 294 IPR000742 -
Mtr3g3010 751 SMART egf_5 298 334 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3010 Mtr-Chr3 44034016 44037298 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3010 1 715 Receptor kinase-like Gene Family AT1G21230 44.672 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mtr3g3010 Pkinase 5.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3010 - - mtr:MTR_3g088780 992.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3010 3 44034016 44037298 Mtr3g3010 3 44034016 44037298 ECH