Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3002 ATGCCACGGCACCGTTGCACAGTGTACTCCGAGAGCGATTACGACGACGACGACGATAACGTCACCATGAGATGTCTCTCTTGCGAGGACGATTACGACCCCGACGACGCCGGTACCTGCAAAGAATGCTACGACGAAGCCAACGAAACCGAAGAGGAGTTCAAACGTCAGATCCAAGACCTCAAATCCAAAGTCTCCTTCCTCACTCTCGCTTCTCCTCTTGATGCTCCTTCCACCACCGATCTTGTCCTTCTTCCGTCCGGTGATAGTTTCTCTCCTTCCATTCCCGCTCACAAGGCCGTTCTCGTTAGTCGCTCTCCAGTTTTCAGAGCCATGCTTGAGAATGATATGGAGGAAAGCCGAAGTGGCACCATCAAGATTGCTGATGTATCGTACGATGCTCTTCGTGCTTTTGTTAACTACTTGTACACTGCTGAAGCATGCCTTGATAACCAAATGGCATGTAACCTATTAGTTTTAGGAGAAAAATATCAGGTGAAGCATCTTAAGGCGTATTGTGAGAAGTATTTGATCTCCAAACTGAATTGGGAGAAAGCTATTGTCAACTTTGCCTTTGCACATCAACACAATGCCAACCAATTGCAAGATGCAGCTTTGGCAGTGATCATGGAGAATATGGACAACCTCACTAAAAATGAAGATTATACGGAGCTGGTGGAAACTAATCCTCGTTTAGTTGTGGAAATATATGAAGCTTATCTTGCCAAACAGGTTAATACTGCAGCCACGCTAGGGTTATAG 762 0.4606 MPRHRCTVYSESDYDDDDDNVTMRCLSCEDDYDPDDAGTCKECYDEANETEEEFKRQIQDLKSKVSFLTLASPLDAPSTTDLVLLPSGDSFSPSIPAHKAVLVSRSPVFRAMLENDMEESRSGTIKIADVSYDALRAFVNYLYTAEACLDNQMACNLLVLGEKYQVKHLKAYCEKYLISKLNWEKAIVNFAFAHQHNANQLQDAALAVIMENMDNLTKNEDYTELVETNPRLVVEIYEAYLAKQVNTAATLGL* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3002 253 PANTHER GH01369P 22 250 - -
Mtr3g3002 253 Gene3D Potassium Channel Kv1.1; Chain A 47 181 IPR011333 -
Mtr3g3002 253 SUPERFAMILY POZ domain 75 179 IPR011333 -
Mtr3g3002 253 CDD BTB_POZ_ZBTB_KLHL-like 80 164 - -
Mtr3g3002 253 Pfam BTB/POZ domain 78 180 IPR000210 GO:0005515
Mtr3g3002 253 SMART BTB_4 80 181 IPR000210 GO:0005515
Mtr3g3002 253 ProSiteProfiles BTB domain profile. 80 151 IPR000210 GO:0005515
Mtr3g3002 253 Coils Coil 44 64 - -
Mtr3g3002 253 Gene3D - 182 251 - -
Mtr3g3002 253 PANTHER SPECKLE-TYPE POZ PROTEIN 22 250 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mtr3g3002 BTB 4.1e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3002 K10523 - gmx:100794118 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3002 3 43847065 43848639 Mtr3g3002 3 43847065 43848639 ECH