Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2998 ATGCAAAAAACTTGTGATGAGGGTGGCTCCGATGGCCGGACGGTGGTGGTGGGAGTGAAAATGGATTCACCAAGCAAAGAGCTTCTTACTTGGGCTTTGGTTAAAGTTGCTCAACCTGGTGATCTTGTAGTTGCTCTGCATGTTCTTGGGACTAATGAAATTGTGAATGGAGATGGGAAATCATCGTTGCTTTCTCTTGTTAAGGCTTTTGACTCTGTTCTTAATGTTTATGAAGGATTCTGTAATTTGAAGCAGGTGGATCTTAAACTAAAAATTTGCCGTGGATCATCGGTGAAGAGAATTTTGGTACGAGAAGCAAATGCTTATTCTGCATCTCATGTTATTGTTGGAAGTGTTCATGGTTTTCATAGAATTCGGTCATCTAGCTCTGTAGCTAAGTATTGTGCTAAAAAGTTATCCAAGGACTGTTGTGTTCTTGCTGTGAATAATGGAAAGGTTGTGTACAAGCGTGACAGCTTGGCAGCATCAACTGTTGCTGATGTACAAGGGTTTGATCGTCAACGTGGAAATGGTTTGCTTGGTTCAATTCAATTGACACATGGTTTGCTTGGTTCGATTCAATTGACACTCAGTAAGAATACAAAAGTACTTAATGCTGATACTGATGAGGGAACTCGACGGATTTCGGATCACAGTTTAGCTAAGGTTTTACTGGATTCTACAGAAAATGTTAGACATCAGAGTTGCTCAATTTGTGGCTCATTGAAAGACACTTCTTGCCATCAATCTGCAGAAGAGCCTTCAGAAGGATCTGAAGTCTCATCTGGTGATGGTGGAAATGAGAATTCTTTGGCAATAGTCCCTGTACAGACAACTGATGCAGGGCAGCTTGAATTGAAACCCGGTTGGCCACTACTACGTCGGAATTTTTTACCAGACCGGCAATTACCTGATAAACTGTTCACGCGGGACCAGATCTCTGTGGTTCAGTGGGCAATGAGGTTGCCGCGTAGAAATCTTTCATACCATGTTGATCATGATAAACAAGTTAGTATTTGTGATAAAGCTCAGGGTCAATCTGTGGCTTTAGATAGTGAAAGTGGTGCCCTTATTCCAGTAGATTCGGAAATGGGGAAAACTTATTCGTCGCCTGAATGCAATTTAAAAAGTATTCCAAAAGAATTGGAGGGCCTTCATGAGAAATACTCATCAACTTGCATATTGTTTGAGTACCAAGAACTTGTATCAGCAACATCAAATTTTTTGCCTGAAAATTTTATTGGGAAAGGAGGAAGTAGTAAGGTTTACCGAGGCTGCCTTCGTGATGGCAAAGAACTTGCTGTCAAGATCCTAAAGCCTTCGTATGATGTTTTGAAAGAGTTTCTTTTGGAAATAGAAATCATCACCACATTGCATCACAAAAACATTATTTCCCTCATCGGGTTCTGCTTCGAGAATGGCAATCTACTCTTGGTCTATGATTTCTTATCAAGAGGAAGCCTTGAAGAGAACATTCATGGGACTAAGAAAAACCCTCGCGAGTTTGGTTGGACACAGAGATATAAGGTTGCAACAGGCGTTGCTGAAGCTTTGGAATATCTGCATTGTAAAGACGATCATCCCGTGATTCATCGGGATGTAAAATCATCCAATGTATTACTATCTGAAGATTTTGAACCTCAGCTCTCTGATTTTGGATTGGCTACGTGGGCATCAACTTCATCATCTCATATAACGTGCACAGATGTTGCTGGAACCTTTGGTTATATGGCTCCTGAATACTTCATGTACGGCAAAGTAAATGATAAGATCGACGTCTATGCATTTGGTGTTGTGCTTCTTGAGCTTCTTTCAGGGAGAAAGCCCATAAGTGTTGATTATCCGAAAGGTCAACAGAATCTTGTTATGTGGGCAAGTCCACTTATAAATAGTGGAAAGGTGTCACAATTGTTAGATCCTAGTTTGGGTGATAACTATGATCATGATGAGATGGAAAGAATGGTATTAGCAGCCACTCTTTGTATCAAACGTGCTCCAAAAGCTAGGCCACAAATGAGCATTGTTTCAAAGCTACTTCAAGGCGATATTGATGCAATCAAGTGGGCAAGACTAGAAGTCAATGCTTTGGAAGCGCATGAAATGCTCGATGATGAAGTATGTCCACCAAGTAATATACAGTCACATCTTAATCTTGCACTGCTTGATGTGGATGATGACTCACTCTCCATGTACAGTGTTGAGCAAAGTGTTTCATTAGAGGACTACTTGAGAGGCAGGTGGAGCCGAGCATCAAGTTTTGACTGA 2265 0.4102 MQKTCDEGGSDGRTVVVGVKMDSPSKELLTWALVKVAQPGDLVVALHVLGTNEIVNGDGKSSLLSLVKAFDSVLNVYEGFCNLKQVDLKLKICRGSSVKRILVREANAYSASHVIVGSVHGFHRIRSSSSVAKYCAKKLSKDCCVLAVNNGKVVYKRDSLAASTVADVQGFDRQRGNGLLGSIQLTHGLLGSIQLTLSKNTKVLNADTDEGTRRISDHSLAKVLLDSTENVRHQSCSICGSLKDTSCHQSAEEPSEGSEVSSGDGGNENSLAIVPVQTTDAGQLELKPGWPLLRRNFLPDRQLPDKLFTRDQISVVQWAMRLPRRNLSYHVDHDKQVSICDKAQGQSVALDSESGALIPVDSEMGKTYSSPECNLKSIPKELEGLHEKYSSTCILFEYQELVSATSNFLPENFIGKGGSSKVYRGCLRDGKELAVKILKPSYDVLKEFLLEIEIITTLHHKNIISLIGFCFENGNLLLVYDFLSRGSLEENIHGTKKNPREFGWTQRYKVATGVAEALEYLHCKDDHPVIHRDVKSSNVLLSEDFEPQLSDFGLATWASTSSSHITCTDVAGTFGYMAPEYFMYGKVNDKIDVYAFGVVLLELLSGRKPISVDYPKGQQNLVMWASPLINSGKVSQLLDPSLGDNYDHDEMERMVLAATLCIKRAPKARPQMSIVSKLLQGDIDAIKWARLEVNALEAHEMLDDEVCPPSNIQSHLNLALLDVDDDSLSMYSVEQSVSLEDYLRGRWSRASSFD* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2998 754 ProSitePatterns Serine/Threonine protein kinases active-site signature. 529 541 IPR008271 GO:0004672|GO:0006468
Mtr3g2998 754 Gene3D HUPs 12 150 IPR014729 -
Mtr3g2998 754 Gene3D Phosphorylase Kinase; domain 1 375 482 - -
Mtr3g2998 754 SMART serkin_6 408 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2998 754 Gene3D Transferase(Phosphotransferase) domain 1 483 692 - -
Mtr3g2998 754 Pfam Protein kinase domain 412 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2998 754 SUPERFAMILY Protein kinase-like (PK-like) 389 678 IPR011009 -
Mtr3g2998 754 Pfam Universal stress protein family 13 145 IPR006016 -
Mtr3g2998 754 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 13 151 - -
Mtr3g2998 754 ProSiteProfiles Protein kinase domain profile. 408 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2998 754 CDD STKc_IRAK 414 681 - -
Mtr3g2998 754 PANTHER OS01G0253100 PROTEIN 7 748 IPR045271 GO:0004714|GO:0006468
Mtr3g2998 754 CDD USP_Like 14 148 - -
Mtr3g2998 754 MobiDBLite consensus disorder prediction 247 270 - -
Mtr3g2998 754 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 7 748 - -
Mtr3g2998 754 ProSitePatterns Protein kinases ATP-binding region signature. 414 436 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2998 Mtr-Chr3 43824148 43828401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2998 395 675 Trihelix Transcription Factor Family AT1G68690 46.341 2.00e-74 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mtr3g2998 Pkinase 2.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2998 - - aprc:113846853 1039.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2998 3 43824148 43828401 Mtr3g2998 3 43824148 43828401 ECH