Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2996 ATGGGTTCGTGTGGTGAACCTGCAATTGCTGGTGATCCATCTGGTTTGTCTGTGATGGAGCAGCCTTTGAGCTCGGAGTTTCCGGCAGAGTTGGATTCTGTGCAGGAGACATGTTTAGAGGAAGCTTGCAATGGCATTGTTGATGGTTTTGTGGAAGAGGTTCATGTGGGTTGTTCTGCAAGCTTTGTTGAAAATGAATGTGAAAATGATGATACGTTACAATTGGAGAAAATCGATGAAGATGGTTGTCGGAATAGTTTGGGGGTTTCTTCTGAGGATATTGAAGTTACTGATCTTAAAAGTGGTGGATTGTGCTCAGTAGGAAATTTACAAGATAAAGGCAACATTGACCTGCCGTTGGAGTCAATAACCTCAATCGTTGGCGATCCCTCTGGCTTGTCTGTAATGGAGGAACCTTTGAGCTCGGGGTTTCCGGAACAGTTAGATTCTGTGCAGGAGTCATGTTCAGAAGAGCCTTGCAATGTTTTAGACCAATCCGGTATGACTGATGGTTCTATGGGAGCGGGTCACGTGGGTTGTTCTGCAAGCTTTGTTGACGCTCATGTTACCGCAAGGTCTGAAGATGCTTTGAGAAATGAATGTGAAAATGATGATTTGTCACAATTGGAGAAAACTAACGAAGATGGTTGTCAGAATACTTTGGGGGTTCGTTTCAAGGACGTTGGAGCTTCTGATATTAAAAGCGGTGGACTGTGCTCAGAAGAAAATTTTCCAGATGAAGGCTATTTTGATCTGCAATTGGAGTCCATAACCTCAAATAATTTGCAGGAGCATTGTGATGAACATGCTGACCAGAAAGATGAGAAAAGCATTGTTTTATCCTCGGCAGGAGATGATTTGGAAGTCATGGAGGGCAAAAATGATGATGGTGCTGATTTACTAGCAGGTGCCGTCAACCGTGAGCTTAACGTCAGACATTCTGAAGTCTCTTCGGAATCAGATTTCGTTGCAGACTTGCTAGTTGATTGCGACCAGAAATATGAGCCAGAGGAGATTACGAAAAGTGAAGATAGCTTGCCGAAGGTTGTGGAAAGGGTTGATTGTAATGCTTTAGATGGGATGGAAGCCAATTCTTGCAGGCAGATATCTCCTTCGTTGGATGCTGAAGTACCTTCAGGTGCCTTATGTATAGACACAAAACTAGAGACCACAAGTGACATGCTACACGATCAGAAAAATGGCGAGGATTGTGACAGTATTTGTGAAGAAAAGATAAGAGCCGTTGTTAAGAATGAAATCACACAGTCTCCTTTTTTGGATGTGGAAATGCCATCAGGTGCATTATTTATCGATACAAAACTAGAAAGCACAAGTGATATGCTACACAATCAGAAAACTGGCGAGGATTGTGACAGTACTTGCGAAGAAAAGTTAACAGCCGTTGTTAAGAATGATATCACACAGTCTCCTTTGTTGGATGTGGAAATGTCGTCAGGTGCATTATTTATAGAGGCAAAACTAGAGAGCACAAGTGATATGCTACGCGATCAGAAAACTGGCGAGGATTGTGACAGTACTTGTGAAGAAAAGATAAGAGCCGTTGTTGAGAAAGAAATCACAGCCAATTCATATGTACAAGCATTGCCCTCGCCATATTTTCATACAACCTTGAGGATTTCACCTGCAATTGATTCACTAAGTCAACCTACCTTGCTGGATCCAGGGAGTGAATTAAAGAATGGCATACTTCAATTAGAAGATAATTTAAAACCATTTTATCCAGAATCAGGTCAGTCCTCTTCTGTTTTAATGACCAATAGCACTCCAAAGGATGTGCCTGATCTCCTTTCCAAGGGTGACGGTGATTCCATCAACAATAATTGTGCTATAGACGATTCTGGACAGACAAATAATGATGGAAAAGAAGCTGTTGAAGTTGATTGTATCACTGAAAGCATACCGTTACCTCCTCAAAGGAACAGTCGAAGAACCAAATTTGGTTGCAAGACACAAACCAGAAAGGCTTCTAGAAAATCCAAGAACAAAGTCAGTGAGACACATCCAGGCGGGGGTGTGAAGATGAACTTAGAGGCTGCTAGAAAGAAAAGAAGTTGTTTATCCAAACCAGCCCGTTCTTGTGCCTGGGGCTCGCTCGGCAATGTTGAACAGTTTTTCCAATATGAAAATGAGCTTGGTGTTAGTGAAGCCATGTGCCAGAATGAGGGTAAAGCTAGAAACAAGAGTCAAGGCGGGACAACGATCAAGAATGGTGCAAGTTCTAGCTCATTAAGTTCAATTCCAAAGCATAATGTTTCAACTTCAACTACTCGTTTTCGTCTGAAGATCAAGTATGGAAAAGAAAATGATTTACATTGCTCAAATGTTCCGGAGTCTGTTGGTGGCTTGGCTTCTGCTTCCTACTTGGGGTCTGATTCAGGTTCTCAGAACGTGACCGGCAATTCTGCAGATAAATTTTCTGAAGTGTTGGCTGTAAACAGTTTAGAATCATTTAGAAATGACCTGGACAAGGATTGTGTTGTTGTAAATGAACAAATTGTAAATAGCCAGCTAGAAAATTCTAAAATAATGGAGAAGTTAGATGTGGTTGCAGAGGAAACATGTCATGCAGTTCCTCCAGAGAGAGTGGTTGAAGCATTAGTTAAGCCAATTAATAATTCAGTTATAGATCCAGGAACATCACCTGATTCAGAAGTTATTGATTCAATTCCTGAAGCCCAGGTTGGAGAAAGACTTGAAGAAGATGCACATCTTGCTGTGTTAGGTTCTTCTGATGAGTTAAATTCTAATATGGATGCTACCTTCAGGAAGAGAGAGAAGAAGAAAGACAATCTTATTCGTTCAGGAAATTGTATCACTCAAGATGGATCACAAGATCAACCAGGGAATAATATAGCCAAGCATTCGAAGAATCACAGACGTAAGAAGAACTGCAGTGACATGGTTAGCTCTTTAGAATTGCCGACTTCCACTGAGCTAATCAAATCTGTAATGAGTAAAGAGTTGGCTGCAGAATCATTGCCCCGTTCTGGAGAGATTGTACTTGGAGTCTCCACCAAGGCTTTGAAAGTTAGAAGTCAGGAGAAAGTCAAGGGCAAGACAGCTGGTCAAACATCTGGTGATCATGGATTTTCTGAATTCCAGGGTTCTGGGGATTTTCCGTCTTCTAGAAGACCTTTGGGTCGTAAACTACCGAAAAGTCTTGAACCTAAAGTTAGCAAGGCCAAATCCAAAGTTTCTGACTCGACAAGCAGTCAAAAGACTACTACTGGACGCAAGGAGAAACAGAAAGAGCCAAGTAACAAAAGTGAAGCCAGGGGTAAAGGCGTTTCTCTCAAAGTTACATGCGAAGTGGAAGATCACCCGCATCCAGCAGATGCAGTTGGAAATCATAAGTTGGATGCTGTTGGAAAAATTAATCCCAGTGACAACAGAGTATCAGTCAATGTATCTAATTTGGACATGACACCTAGTTTTGATTTGGGAGAACAACCTCAGTCGCCGCGTAATGCATGGGTGAGTTGTGATGATTGTCACAAGTGGCGGCGTATTCCAGCTTTGCTTGCTGACCGGATTGATGAAACGAACTGCACCTGGACTTGCAAGGACAGCAGTGATAAAGCCTTTGCTGATTGTGCTATCCCTCAAGAAAAATCAAATGCAGAGATTAATGCAGAGTTAGGATTATCATATGCCTCTGGTGAAGAAGATGTATGTGAAGACTCCAAAAATCATAAGGAATTGGAATATCGACTACCACCGGTTGCCCAAGAGTCAACTTTTACCCGCATTTTGACCAATAAGTTTCTGCACCGCAGTCCAAAAACTCAGACTATTGACGAGGTAATGGTTTGCCATTGCAAGCCACCTCCAGAAGGCAAGTTAGGATGTGGGGATGAATGTCTAAATCGGATGCTTAACATTGAATGTGTGCAAGGAACTTGCCCATGTGGGGACCGTTGCTCCAATCAGCAGTTCCAAAAACGCGAGTATTCCAGATTGAAGTGGTTTAAATGTGGGAAAAAAGGTTATGGACTGAAGGCACTTGAGCGTGTAGCTAAAGGCCACTTTATTATTGAATACGTTGGAGAGGTCCTGGACATGCCTGCATACGAGGCACGTCAAAGAGAGTATGCTGTGAAGGGCCATAGACATTTCTATTTTATGACCTTGAACGGCAGTGAGGTGATCGATGCAAGTGCAAAAGGAAACTTGGGGCGTTTCATTAACCATAGTTGTGATCCTAATTGTCGGACAGAAAAGTGGATGGTAAATGGGGAAATCTGTATTGGACTGTTCGCATTGCGGAATATCAAGCAGGATGAAGAATTGACGTTTGATTACAACTATGTAAGGGTTTTTGGCGCTGCTGCCAAAAAATGTTATTGTGGTTCACCTCATTGTCGAGGTTATATAGGCGGTGGTGATCCACTTAATGCTGAGGTTATAGTTCATGGTGATTCAGATGATGAATATCCAGAACCCATGATGCTTACGGAAGATGGTGTAGTTAAGGACAGCACACCTATGCCCAAGTACTTTGATAATGTTGATACAGAGTCTTCTATTCATTTATTGACGGACAGGGATGTATTGGACAAGTCTACAACTGCTATAGATGAAGATGGTTCTCCTGGGAAACATAGTTCTCCAGGGAAATATAGTTCTATGAACCCTGCATCTTCCGTTTTCCCTTTGCACTCAGTTGAAGTGGAAGACTCAAAAAGCAATTTACCATCTTCTGATCGAATAGAAGAAATTTCTCAACAAATGGAGGATACAACAAGCAAACCCATGCCTGCTGTCAGCAAGGTGCTGTCGAATTCTACTGATAGTAAAGAATCCAAGTCTGAAATGGTTGAAGACGGAAATGGTTTTTCGCAATCACATCTGCATGTGAAGACTCCTCAAACTAGCACTTCTGTAAAAAAGGCTAAAGGCAGTGCTAATGCTGCAAATCGCCTTACAGCTGAGGTGGCAGCCAATCGATTGCCAGTGCCATCTATCAAACACAAAAAAGTGGTCGAAGGTGCTTCCAATGGACGGTTTGAAGCAGTTCAGGGGAAACTTAATGAGTTGCTGGATGGAAATGGGGGAATAAGCAAAAGAAAAGATGCCACCAAAGGCTACTTGAAACTTTTGCTTCTCACCGTCGCTTCAGGTGATAGAAGCAACCGTGAAGCAATTCAGAGCAATCGAGATCTTTCCATGATCCTTGACGCTCTTCTCAAAACAAAATCTAGAGCTGTGCTGAATGATATAATTAGTAAAAATGGTTTACAGATGTTGCATAAGATCATGAAGCAGTACAGGCAAGACTTCAAAAAAATTCCAATACTACGAAAGCTTCTTAAGGTCTTAGAGTACCTGGCAGCAGGCAAGGTTTTGACACCTGAACATATCAACAGCGGTCCTCCTTGTCGTGGAATGGAGAGTTTTAGGCGTTCAATGCTGTCTCTGACAGAGCATGATGACAAACAGGTCCATCAAATTGCTCGAAGCTTCCGAGACAGATGGATTCGAAAACAAGGCAGAAAACGTGGCTATATGGACAGGGATGATAATATGTTGGAATCTCACAGAAATTTCAACTGTAACAGAAATTCAGTATCACACAATCATAGGCACGAGCAGGGATTAAGACCTAAGGAAGAAGAAATTGATTGTGGTCAGCGGACAATGCTCGTGACAACTTCAACTTCTGCAGATGCTGGCTCCCAGGAGGGCTGTTCTACACCGTCTTTGGATGGAGTTGAGATCAAAGAGGCAAAAAAACGTAAGCGCAAAAGCCGATGGGATCAACCTGCGGAAACAAATTCATATTCTGGTCCTGTTATTGGCTCTACCAATGAAAGCCAGAAGATTAATGAAGAAATTCCACCTGGGTTTTCATGTCCAATACGTTCATTAAACAGTGCACTAAACTCTGGCGGTCCAGCTTTGCAAAATACAAGCCATTCTGGATGGCCCTCTAGTTTAGTTACTACTGGTCAGCCAAAAGAGAAATTCAATTCTCGTTTGCCTGTCTCATATGGAATGCCATGGTCTGTTGCTCAGCAATACGGAACTCCTCATGCTGAAATCACAGGGTGTTGGGCCACTGCTCCTGGCATACCTTTCTACCCATTTCCGCCATTACCCCCATATCCACGGGATATCAAAGACTGTCAACCTTCTAATACTAATAGTATGGAAATTGACCAGCCTGCTGAAGTTAAGCAAAGGGACGCCAATTGTCTAGTTAATTGCTGCTCAGAGTCAGATCATACGACTCCCAGTCCCAGCACAACTGGTGCTAAGTCTGAAGACACAAACGTTGAATGCGAGGATGCTAAACACGACTCTAAGCGATTGAAGACCGACTCTAGTGATTTGGGAGAGAATCACTTTAGACAGCAGAAGTGGAATAATTCAAAAATACATCGAACATGGTTCAAGAGGAATGCAAGGAGATCTAATGGGAACAGCTCTAGTGGTGATATGTGCAGTATAGATGTAGGAGATGCATCAAAAGAATCAAAAGTTACTAGTGATTCGGAGGATGCAATCTTTAGAGATGAGAAAGGTGGAAAATAA 6555 0.4236 MGSCGEPAIAGDPSGLSVMEQPLSSEFPAELDSVQETCLEEACNGIVDGFVEEVHVGCSASFVENECENDDTLQLEKIDEDGCRNSLGVSSEDIEVTDLKSGGLCSVGNLQDKGNIDLPLESITSIVGDPSGLSVMEEPLSSGFPEQLDSVQESCSEEPCNVLDQSGMTDGSMGAGHVGCSASFVDAHVTARSEDALRNECENDDLSQLEKTNEDGCQNTLGVRFKDVGASDIKSGGLCSEENFPDEGYFDLQLESITSNNLQEHCDEHADQKDEKSIVLSSAGDDLEVMEGKNDDGADLLAGAVNRELNVRHSEVSSESDFVADLLVDCDQKYEPEEITKSEDSLPKVVERVDCNALDGMEANSCRQISPSLDAEVPSGALCIDTKLETTSDMLHDQKNGEDCDSICEEKIRAVVKNEITQSPFLDVEMPSGALFIDTKLESTSDMLHNQKTGEDCDSTCEEKLTAVVKNDITQSPLLDVEMSSGALFIEAKLESTSDMLRDQKTGEDCDSTCEEKIRAVVEKEITANSYVQALPSPYFHTTLRISPAIDSLSQPTLLDPGSELKNGILQLEDNLKPFYPESGQSSSVLMTNSTPKDVPDLLSKGDGDSINNNCAIDDSGQTNNDGKEAVEVDCITESIPLPPQRNSRRTKFGCKTQTRKASRKSKNKVSETHPGGGVKMNLEAARKKRSCLSKPARSCAWGSLGNVEQFFQYENELGVSEAMCQNEGKARNKSQGGTTIKNGASSSSLSSIPKHNVSTSTTRFRLKIKYGKENDLHCSNVPESVGGLASASYLGSDSGSQNVTGNSADKFSEVLAVNSLESFRNDLDKDCVVVNEQIVNSQLENSKIMEKLDVVAEETCHAVPPERVVEALVKPINNSVIDPGTSPDSEVIDSIPEAQVGERLEEDAHLAVLGSSDELNSNMDATFRKREKKKDNLIRSGNCITQDGSQDQPGNNIAKHSKNHRRKKNCSDMVSSLELPTSTELIKSVMSKELAAESLPRSGEIVLGVSTKALKVRSQEKVKGKTAGQTSGDHGFSEFQGSGDFPSSRRPLGRKLPKSLEPKVSKAKSKVSDSTSSQKTTTGRKEKQKEPSNKSEARGKGVSLKVTCEVEDHPHPADAVGNHKLDAVGKINPSDNRVSVNVSNLDMTPSFDLGEQPQSPRNAWVSCDDCHKWRRIPALLADRIDETNCTWTCKDSSDKAFADCAIPQEKSNAEINAELGLSYASGEEDVCEDSKNHKELEYRLPPVAQESTFTRILTNKFLHRSPKTQTIDEVMVCHCKPPPEGKLGCGDECLNRMLNIECVQGTCPCGDRCSNQQFQKREYSRLKWFKCGKKGYGLKALERVAKGHFIIEYVGEVLDMPAYEARQREYAVKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRNIKQDEELTFDYNYVRVFGAAAKKCYCGSPHCRGYIGGGDPLNAEVIVHGDSDDEYPEPMMLTEDGVVKDSTPMPKYFDNVDTESSIHLLTDRDVLDKSTTAIDEDGSPGKHSSPGKYSSMNPASSVFPLHSVEVEDSKSNLPSSDRIEEISQQMEDTTSKPMPAVSKVLSNSTDSKESKSEMVEDGNGFSQSHLHVKTPQTSTSVKKAKGSANAANRLTAEVAANRLPVPSIKHKKVVEGASNGRFEAVQGKLNELLDGNGGISKRKDATKGYLKLLLLTVASGDRSNREAIQSNRDLSMILDALLKTKSRAVLNDIISKNGLQMLHKIMKQYRQDFKKIPILRKLLKVLEYLAAGKVLTPEHINSGPPCRGMESFRRSMLSLTEHDDKQVHQIARSFRDRWIRKQGRKRGYMDRDDNMLESHRNFNCNRNSVSHNHRHEQGLRPKEEEIDCGQRTMLVTTSTSADAGSQEGCSTPSLDGVEIKEAKKRKRKSRWDQPAETNSYSGPVIGSTNESQKINEEIPPGFSCPIRSLNSALNSGGPALQNTSHSGWPSSLVTTGQPKEKFNSRLPVSYGMPWSVAQQYGTPHAEITGCWATAPGIPFYPFPPLPPYPRDIKDCQPSNTNSMEIDQPAEVKQRDANCLVNCCSESDHTTPSPSTTGAKSEDTNVECEDAKHDSKRLKTDSSDLGENHFRQQKWNNSKIHRTWFKRNARRSNGNSSSGDMCSIDVGDASKESKVTSDSEDAIFRDEKGGK* 2185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2996 2184 MobiDBLite consensus disorder prediction 942 976 - -
Mtr3g2996 2184 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC 655 2112 - -
Mtr3g2996 2184 Pfam AWS domain 1288 1322 IPR006560 GO:0005634|GO:0018024
Mtr3g2996 2184 ProSiteProfiles SET domain profile. 1325 1442 IPR001214 GO:0005515
Mtr3g2996 2184 MobiDBLite consensus disorder prediction 1614 1637 - -
Mtr3g2996 2184 MobiDBLite consensus disorder prediction 1969 1990 - -
Mtr3g2996 2184 MobiDBLite consensus disorder prediction 729 757 - -
Mtr3g2996 2184 MobiDBLite consensus disorder prediction 2142 2156 - -
Mtr3g2996 2184 MobiDBLite consensus disorder prediction 1584 1606 - -
Mtr3g2996 2184 SMART set_7 1325 1448 IPR001214 GO:0005515
Mtr3g2996 2184 Gene3D - 1155 1218 - -
Mtr3g2996 2184 MobiDBLite consensus disorder prediction 1861 1944 - -
Mtr3g2996 2184 MobiDBLite consensus disorder prediction 2096 2121 - -
Mtr3g2996 2184 MobiDBLite consensus disorder prediction 1863 1883 - -
Mtr3g2996 2184 ProSiteProfiles Post-SET domain profile. 1450 1466 IPR003616 -
Mtr3g2996 2184 SUPERFAMILY SET domain 1253 1463 IPR046341 -
Mtr3g2996 2184 MobiDBLite consensus disorder prediction 1024 1045 - -
Mtr3g2996 2184 CDD SET_SETD2 1324 1466 IPR044437 GO:0010452|GO:0046975
Mtr3g2996 2184 PANTHER SET DOMAIN PROTEINS 655 2112 - -
Mtr3g2996 2184 MobiDBLite consensus disorder prediction 1528 1554 - -
Mtr3g2996 2184 MobiDBLite consensus disorder prediction 1 20 - -
Mtr3g2996 2184 MobiDBLite consensus disorder prediction 1081 1097 - -
Mtr3g2996 2184 MobiDBLite consensus disorder prediction 640 679 - -
Mtr3g2996 2184 ProSiteProfiles AWS domain profile. 1273 1323 IPR006560 GO:0005634|GO:0018024
Mtr3g2996 2184 MobiDBLite consensus disorder prediction 1885 1906 - -
Mtr3g2996 2184 ProSiteProfiles Zinc finger CW-type profile. 1159 1213 IPR011124 GO:0008270
Mtr3g2996 2184 MobiDBLite consensus disorder prediction 942 958 - -
Mtr3g2996 2184 MobiDBLite consensus disorder prediction 1055 1069 - -
Mtr3g2996 2184 Pfam CW-type Zinc Finger 1165 1211 IPR011124 GO:0008270
Mtr3g2996 2184 Gene3D SET domain 1222 1474 IPR046341 -
Mtr3g2996 2184 SMART PostSET_3 1450 1466 IPR003616 -
Mtr3g2996 2184 MobiDBLite consensus disorder prediction 1017 1103 - -
Mtr3g2996 2184 MobiDBLite consensus disorder prediction 2164 2184 - -
Mtr3g2996 2184 MobiDBLite consensus disorder prediction 2077 2184 - -
Mtr3g2996 2184 MobiDBLite consensus disorder prediction 1928 1944 - -
Mtr3g2996 2184 SMART shorttest3 1273 1324 IPR006560 GO:0005634|GO:0018024
Mtr3g2996 2184 Pfam SET domain 1336 1442 IPR001214 GO:0005515
Mtr3g2996 2184 MobiDBLite consensus disorder prediction 2077 2095 - -
Mtr3g2996 2184 MobiDBLite consensus disorder prediction 1580 1637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2996 Mtr-Chr3 43781780 43796789 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2996 1307 1466 Su(var)3-9 homologs AT1G73100 34.536 2.56e-19 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mtr3g2996 SET 2.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2996 - - mtr:MTR_3g088625 4357.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2996 3 43781780 43796789 Mtr3g2996 3 43781780 43796789 ECH