Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2979 ATGTTTACCCGAAGCCGACGCTTTGCTTCTTCTTCATCATCGGAGAAGAAGCCTTCCGTTTCAGAGAATTCAACTTCAAACAAGAATGTTGCCGCCGTGAAGACTCGCTTGACGAAGAAACGTCCCGCTCTCGCCGACGTTACCAATAACAGAAATGCCTCTCTCGTCAAAACCTCCCTTGCTGCTCCATATAAGCCCATGGTTCCATGTGCGTCCAAAACTGCAAAGACAAAGAAGGATTCCATTGCAAGTTCGCAGAAAAATGTTATGTCCGAGAACATTTTGCAACCCTCATCGAGAATAAGATCGAGTGGATTTCTGGTCTCCAAAGAGGCATGTTCGACCAAAGCTAGTCAAATTAAGACTGGAGTTAAAGCATTCATTGCTCCAAGCAATGATGGTGCTGTTTGTCCAGATTTTAAGAGTGTGGTCTGTAGTCCGAGATGGATGGACATTTACCCAAGTAATTCCTTCAGCGGTTCTGCTTCACTGGATGAGAGCATGTCAACCAGCGATTCTCTGATGACTCCAGAATTTGAATATATTCGGAATGACGATGTTGTATCAATCAAATCAATTGAGAATAAAACATGCAACATTCTCAATATTTCAGACTCTTCCAAAATGGGAGGGAGAATACATGATATTGATACCATACTGAAGTCAAGAGCAAATGAATTTGTAGACATTGACCGCAATACCAAAGACCCACAGTTTTGTGCATCCTTTGCCCATGAAATCTATGAAAATTTGCGTGTATCAGAGAAATTTAAAAGGCCATCTATGGACTACATGGAGAAGATACAGAAAAAGATCAATGCTAGCATGCGGGCAATGCTTATTGATTGGCTTGTGGAGGTTGCTGACGAGTACAGACTCCTACCTGATACACTATTTTTGGCAGTTAACTACCTTGATCGCTATCTTTCAGGCAAAGCAATGAACACGCAGCAGTTACAACTACTTGGTGTTACCTGCATGATGATTGCTGCTAAATACGAGGAGATCTGTGCACCTAAGGTGGAAGAGTTCTGTTATGTAACTGATAATACATATTCTAAGGAGCAGGTGCTGGAGATGGAGTCCTCTGTTCTGAATTTCTTGAAGTTTGAAATGACAGCTCCTACAATTAGATGTTTTTTGAGACGCTTCATTACTGTTGCCCAACAAACATGTGAGATTCCATTGATGCAGTTGGAGTATTTGGCCGACTATGTAGCGGATTTATCGCTTCTAGAGTATGATATGCTTAAGTACACCCCATCATTAATAGCTGCATCAGCCACTTTCTTGGCTAAATATATACTACTTTCGACAAAGAATCCCTGGAACTCTATGCTAAGGCATTACACAGGTTACCAAGCATCAGAATTGCGGGAATGTGTTGAGGGATTGCATTTGTTGTACCGAAATGGCTATCATAGTTCACCTTCCATTACTGCTATCAGAGAGAAATACAGTCAGCATAAGTTCAAGTTTGCTGCAAAGAAGTGTTGTCCTCCATCAATACCAGTAGAAGTATTTCACAACTGA 1533 0.4149 MFTRSRRFASSSSSEKKPSVSENSTSNKNVAAVKTRLTKKRPALADVTNNRNASLVKTSLAAPYKPMVPCASKTAKTKKDSIASSQKNVMSENILQPSSRIRSSGFLVSKEACSTKASQIKTGVKAFIAPSNDGAVCPDFKSVVCSPRWMDIYPSNSFSGSASLDESMSTSDSLMTPEFEYIRNDDVVSIKSIENKTCNILNISDSSKMGGRIHDIDTILKSRANEFVDIDRNTKDPQFCASFAHEIYENLRVSEKFKRPSMDYMEKIQKKINASMRAMLIDWLVEVADEYRLLPDTLFLAVNYLDRYLSGKAMNTQQLQLLGVTCMMIAAKYEEICAPKVEEFCYVTDNTYSKEQVLEMESSVLNFLKFEMTAPTIRCFLRRFITVAQQTCEIPLMQLEYLADYVADLSLLEYDMLKYTPSLIAASATFLAKYILLSTKNPWNSMLRHYTGYQASELRECVEGLHLLYRNGYHSSPSITAIREKYSQHKFKFAAKKCCPPSIPVEVFHN* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2979 510 Pfam Cyclin, C-terminal domain 375 498 IPR004367 -
Mtr3g2979 510 CDD CYCLIN 276 365 IPR013763 -
Mtr3g2979 510 Gene3D - 246 495 - -
Mtr3g2979 510 SMART Cyclin_C_2 375 500 IPR004367 -
Mtr3g2979 510 SUPERFAMILY Cyclin-like 375 502 IPR036915 -
Mtr3g2979 510 MobiDBLite consensus disorder prediction 1 33 - -
Mtr3g2979 510 PANTHER CYCLINS 28 509 IPR039361 -
Mtr3g2979 510 Pfam Cyclin, N-terminal domain 246 372 IPR006671 -
Mtr3g2979 510 Gene3D - 260 373 - -
Mtr3g2979 510 SUPERFAMILY Cyclin-like 235 372 IPR036915 -
Mtr3g2979 510 MobiDBLite consensus disorder prediction 1 50 - -
Mtr3g2979 510 CDD CYCLIN 373 466 IPR013763 -
Mtr3g2979 510 PIRSF Cyclin_A_B_D_E 1 508 IPR039361 -
Mtr3g2979 510 ProSitePatterns Cyclins signature. 277 308 IPR006671 -
Mtr3g2979 510 SMART cyclin_7 379 467 IPR013763 -
Mtr3g2979 510 SMART cyclin_7 282 366 IPR013763 -
Mtr3g2979 510 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 28 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2979 Mtr-Chr3 43618466 43624307 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2979 113 510 Core Cell Cycle Gene Families AT1G44110 55.147 1.50e-153 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2979 K06627 - jre:108999040 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2979 3 43618466 43624307 Mtr3g2979 3 43618466 43624307 ECH