Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2974 ATGGCTGCATTCCAAGTCCTCTCTACCCATACAATCAAGTCACCAAATTCAAGTGATCAAAAAATTGATTTAACTCCATGGGATCTCCGGTACCTACTAATTGCACCCACCAAAAAGGGTCTTCTTTATCACCATCCTCTAGTGCCAAACCAAATTCAACATCTGAAACACTCTCTATCTTCTACCCTTGCCTTTTTCCCACCACTTGCAGGCCGTCTAGAAATAACAGATCACAAGGACAACACCGTTTCATGTTCCGTCACATGCAACAATGCAGGCGCGCTCTTTGTCCATGCTGCGGCAGAGAACACTTGTGTAGGTGACATACTTGGATGCACCTACGTTCCTCCCATCGTCGATTCATTTTTTCCATTAACCAGAGTTAAAAATTACGAAGGCACATCACAACCATTGTTAGCTGTGCAAGTGACAGAGTTAGTTGACGGCTTCTTCATTGGTTTTACATTTAACCATGCGGTTGTTGACGGAGAGTCCACATGGCTTTTCATTAATTCATGGGCGAAAATCTCGCGTGGTTGTTGCAATCAAGTATCCAAACTCATAACGCTAGAACGTTGGTTTCCAAGTGGTATTCAACATCCCATACGATTTCCTTTTACTATAGAGCCACAAAAGAATGACTCTGATGATAACGAAAAGTTCAATCCATCAGAGAGGTTATTCCATTTCACAAAGGAGAAAATCGCTCAACTGAAATTGAAAGCCAACATGGAGATTGGTACCAACAAAATATCATCCCTCCAATCACTTTTTACACATCTTTGGCGCTCTGTGATCCGTTCCAAACAATTTGACCCACACGAAGAAGTTTATTATATGGTCGCGATAGGAGCTAGATCAAGGTTTGTTCCACCATTGCCTGAAGATTATTTTGGAAATGCTGTTGAAGTTTGTAGGGTTACAATGAAAGCGGGAGAGTTGTTGGAAGATGGTGGGCTTGGTAAAGGTGCTTGGGCGATACACAAAATGATTTCTTTGCAGTCAAATGAAGAGTTGAAGAATCACTACGTGTCTTGGTTGGAAAATCCAAACATCGTTAGATTTTTTACCGCGGCCGGTAAAAATACATTAGCCAGTAGCAATTCCCCGTGGTTTGATGTTTATGGTAATGATTTTGGATGGGGAGAACCTGTGGCAGTTCGCAGTGGAAATAAAATAAGTGGAATGATTACTGTATTTGCTGGAAAAGAAGAAGGTAGCATGGACTTTCAAGTGTGTCTTCCTCACAAGATTTTGGAGGCAATGGGAAATGACCATGACTTCATGGATGTTGTGTCTAATTAG 1305 0.4161 MAAFQVLSTHTIKSPNSSDQKIDLTPWDLRYLLIAPTKKGLLYHHPLVPNQIQHLKHSLSSTLAFFPPLAGRLEITDHKDNTVSCSVTCNNAGALFVHAAAENTCVGDILGCTYVPPIVDSFFPLTRVKNYEGTSQPLLAVQVTELVDGFFIGFTFNHAVVDGESTWLFINSWAKISRGCCNQVSKLITLERWFPSGIQHPIRFPFTIEPQKNDSDDNEKFNPSERLFHFTKEKIAQLKLKANMEIGTNKISSLQSLFTHLWRSVIRSKQFDPHEEVYYMVAIGARSRFVPPLPEDYFGNAVEVCRVTMKAGELLEDGGLGKGAWAIHKMISLQSNEELKNHYVSWLENPNIVRFFTAAGKNTLASSNSPWFDVYGNDFGWGEPVAVRSGNKISGMITVFAGKEEGSMDFQVCLPHKILEAMGNDHDFMDVVSN* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2974 434 Gene3D - 1 201 IPR023213 -
Mtr3g2974 434 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 432 - -
Mtr3g2974 434 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 6 432 - -
Mtr3g2974 434 Pfam Transferase family 13 427 - -
Mtr3g2974 434 Gene3D - 207 424 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2974 Mtr-Chr3 43594784 43596397 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2974 53 391 Monolignol Biosynthesis Gene Families AT5G48930 28.809 2.43e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2974 - - gmx:100500257 505.368