Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2966 ATGGCGGATAGGGTTGACACTGTTGCAAGACTAGCACAATGGAAAATCGAAAACTTCGGTCCTTGTTCTTACAAAAAATCTGATCCTTTCAAGCTCGGAATCTGGAATTGGTATTTTTCAATAGTAAGGAATAGGTTCTTCTCCATTCATCTCTTTCCAGAACCTTCTAAAGTTTCTAAGGACCACCCACCCGTTGCTCGTTTCATACTTCGTGTCTCCGTTGCTGGTTCTTCCCGCAAGTTTATTGTTTCTCCTGTTTATGAAAGGCTGCTTAGGACACAAGATGACTTTGTCTGGCCTATTGATACTGCTTTCGTGGGTCGCTTCATCATTGATGTTGAATTTCTTGACCTGAAGATATGCCATATGAATGGCGGTGAACCTAGTTCTATATGGTCATCTGATGGAACCTCGCAATGCAATGAAGCTCAAAGAAGTACTCTCCATTGCCTTTCCCGCATGCTCGATGAGGCTATACATGCTGACCTAACCATTATCACTTCTGATGGTACATTGAGAGCTCACAAGGCAATTTTGTCTGCGAGTTCTCCTGTGTTTCAAAGCATGTTTCATCACAACCTGAAGGAAAAAGAGTCGTCAACGATCCATATTGAAGACATGTCACTTGAATCCTGCACTGCTCTTCTTAGTTACTTGTATGGAGCAATTAAACAAGTAGATTTCAGGAAACACTGTCTTGCATTGCTTGGAGCAGCTAATAAGTATGATATTGGTGGTCTGAAAGATTTATGTGAGGAAAACCTTCTTGAAGATATTAACTCCGACAATGTTCTTGAGATGCTAAATGAGGCTTGGCTTTATCAGTTACACAAGTTAAAGAAAGGATGTTTAACATTCTTATTTGAATTTGGTAAAATATATGATGTTAAAACTGATGAAATAAATAATCTTTTCCAGCACGCAGATAGGGAGCTGGTTATGGAGATGTTTCATGTGATGCTTACAATTTCCAACCCAGAATAG 984 0.3974 MADRVDTVARLAQWKIENFGPCSYKKSDPFKLGIWNWYFSIVRNRFFSIHLFPEPSKVSKDHPPVARFILRVSVAGSSRKFIVSPVYERLLRTQDDFVWPIDTAFVGRFIIDVEFLDLKICHMNGGEPSSIWSSDGTSQCNEAQRSTLHCLSRMLDEAIHADLTIITSDGTLRAHKAILSASSPVFQSMFHHNLKEKESSTIHIEDMSLESCTALLSYLYGAIKQVDFRKHCLALLGAANKYDIGGLKDLCEENLLEDINSDNVLEMLNEAWLYQLHKLKKGCLTFLFEFGKIYDVKTDEINNLFQHADRELVMEMFHVMLTISNPE* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2966 327 Pfam BTB/POZ domain 154 257 IPR000210 GO:0005515
Mtr3g2966 327 SMART BTB_4 161 259 IPR000210 GO:0005515
Mtr3g2966 327 Gene3D Potassium Channel Kv1.1; Chain A 129 288 IPR011333 -
Mtr3g2966 327 CDD BACK 260 315 - -
Mtr3g2966 327 PANTHER OS08G0495500 PROTEIN-RELATED 1 327 IPR044714 -
Mtr3g2966 327 CDD BTB_POZ_ZBTB_KLHL-like 160 242 - -
Mtr3g2966 327 ProSiteProfiles BTB domain profile. 161 220 IPR000210 GO:0005515
Mtr3g2966 327 SUPERFAMILY POZ domain 141 257 IPR011333 -
Mtr3g2966 327 PANTHER BTB/POZ DOMAIN PLANT PROTEIN 1 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2966 Mtr-Chr3 43525886 43529205 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mtr3g2966 BTB 5.5e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2966 K10523 - gmx:100787262 538.11