Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2953 ATGGCATCCGAGCTTCAATTGCCACCGGGCTTCAGATTCCATCCAACGGATGAGGAGCTCGTGATGCACTATCTCTGCCGCAAATGCACGTCGCAGCCTATCGCCGTTCCGATCATCGCCGAAATTGATCTATATAAATATGATCCTTGGGACCTCCCAGGTATGGCTACTTATGGAGAAAAGGAGTGGTACTTTTTCTCGCCACGAGACAGAAAATACCCAAACGGTTCAAGGCCGAACCGGGCGGCTGGGTCTGGATATTGGAAGGCAACTGGGGCGGATAAACCAATAGGTCATCCTAAACCGGTTGGGATCAAAAAAGCGTTGGTGTTTTACGCGGGTAAAGCACCTAAAGGTGATAAAACCAATTGGATCATGCACGAGTATCGTTTAGCTGATGTAGATCGCTCCATTCGAAAAAAGAACAGCTTAAGGTTGGATGATTGGGTGCTTTGCCGTATTTACAACAAGAAGGGTACAATTGAGAAACAACCAAGCAACAGTGTTGTCAACCGAAAAACTGAACATTCTGAAATTGAAGACAGGAAGCCGGAGATTGTGACACGTGGGGGCGGTCTTCCGCCACATCCACCGCCGCAAACTACGGCTGGAATTAGGGATTACATGTATTTTGATACATCAGATTCGATTCCTAAGCTGCACACCGATTCGAGCTGTTCGGAACAAGTGGTATCACCGGAGTTTGCAAGTGAGGTGCAGAGTGAGCCTAAGTGGAACGAGTGGGACAAGAATCTTGAGTTTCCTTATAATTATATTGATGCCACTCTGAACACTGGTTTTGGCTCCCAATTCCAAAATACTAATCCATTGCAAGATATGTTCATGTACTTGCCCAAAACCTTTTGA 867 0.4637 MASELQLPPGFRFHPTDEELVMHYLCRKCTSQPIAVPIIAEIDLYKYDPWDLPGMATYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGHPKPVGIKKALVFYAGKAPKGDKTNWIMHEYRLADVDRSIRKKNSLRLDDWVLCRIYNKKGTIEKQPSNSVVNRKTEHSEIEDRKPEIVTRGGGLPPHPPPQTTAGIRDYMYFDTSDSIPKLHTDSSCSEQVVSPEFASEVQSEPKWNEWDKNLEFPYNYIDATLNTGFGSQFQNTNPLQDMFMYLPKTF* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2953 288 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Mtr3g2953 288 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 2 270 - -
Mtr3g2953 288 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Mtr3g2953 288 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Mtr3g2953 288 PANTHER NAC TRANSCRIPTION FACTOR 56 2 270 - -
Mtr3g2953 288 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2953 Mtr-Chr3 43402516 43404854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2953 1 288 NAC Transcription Factor Family AT1G01720 71.333 3.71e-148 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr3g2953 NAM 1.7e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2953 - - gmx:100805768 513.842