Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2927 ATGGGAAAACCTATAGGAGCAGAGCATAAACTTATTGAGCAAACTCTTGTGTTTCCTGCAACAAGAACAGCAACAACTACTTATCTTCCTCTCACATTTCTTGACTTGCATTTTGCTGGTCCAATCTACGCTAAACGCTTATTCTTCTATCCTTTTCCTCATTCTACCAACCATTTTTGCAAAACAACACTTCCATCTCTCAAACAGTCTCTTTCATGTGCTCTTCAACATTTTTTCCCTCTTGCTGGAAATCTCATTTCTCCACCACCACCACAAAAACCTTTTATTCGCTGCACCGAAGAAGACTCCGTCTTCTTCACCATCGTTGAATCCTCGTCAGATTTCAACCATCTCTCAAACAAACACCACCTGAAAAATCTCAAAGAAAATAATCACCTTGCTCCAATATTAACACACAAAACTAGGGTTGAAGATATTAATGACATTGAAAATGACACATTCACTCTTCCATTGTTGGCTTTGCAAGTCTCAGTTTTTCCCAACCATGGTGTTTGCATTGGCATTACATATTGCCACGTGATGGATGGTAACAGTTGCAATCATTTCATGAAATCTTGGTCTTTTATCCATCAAGGAGGTGATGCAGCTGAATTGAAGTCACTACCTTGTTTTGATAGAGAAGTTTTGAAGGACCCTAGAGGACTTGAGGATCTTATTTTAAGAGATTATTTTTTTACAAGAAAATCATGGAAGTTTAGACTCATTGCTCAAAGTCAAAGCACTGGAGAACATGAAGATTCTTTTAAGGTAATTATTGCTTTTGGAAAAGAAGAAATTGAGGGGATGAAAAAATGGGTGCTGAATCAATGGAAGAAAAATGATAATAATGAAATCAACGTGCCAAAATTTATATCTAAATTTGTTGTAACTTCTGCTTTTGTTTGGGCTAGTATGGTTGAAGCAATGCATAAAAATGATGATGGTGGTGATGATGATGATGAAAAAGATGAGTACTTTTGTTTCACATGTGATTGCAGAGATAGACTTGGGTACTCAATACCAGAGGGGTATTTTGGGAACTGTGTAGTGTCTAAAAGTGCAACCATGAAGAGAAAGGATATGAAGGGAATAGATAGTTTTGTTGATGTTGTTAAGGTAATTGAAAAGGCTGTTAATGAGATAAAAAATGAACCTCTTAAAAAATTAGAAGACTGGTTTGAATTAAGTAAAACTATGTATATGTCTGGAAATCAATTGTTTCTGCATGGGTCACCTAAGTTTAATGTTTATGAGACCAATTTTGGATTTGGAAAACCTGTTAAAGTTGAGATGGTGCATGCATTTAAGGGTGTGTCTCTTGCTGAAAGTGGAGATGGAGAAGGTGGACTTGAGTTTGGGTTGGTACTTAAAAGTGAGGAGTTTGAATATTTCTCTTCTCTTATTCAACAAGGACTTGAAGTTTTTAAATATTAG 1434 0.3605 MGKPIGAEHKLIEQTLVFPATRTATTTYLPLTFLDLHFAGPIYAKRLFFYPFPHSTNHFCKTTLPSLKQSLSCALQHFFPLAGNLISPPPPQKPFIRCTEEDSVFFTIVESSSDFNHLSNKHHLKNLKENNHLAPILTHKTRVEDINDIENDTFTLPLLALQVSVFPNHGVCIGITYCHVMDGNSCNHFMKSWSFIHQGGDAAELKSLPCFDREVLKDPRGLEDLILRDYFFTRKSWKFRLIAQSQSTGEHEDSFKVIIAFGKEEIEGMKKWVLNQWKKNDNNEINVPKFISKFVVTSAFVWASMVEAMHKNDDGGDDDDEKDEYFCFTCDCRDRLGYSIPEGYFGNCVVSKSATMKRKDMKGIDSFVDVVKVIEKAVNEIKNEPLKKLEDWFELSKTMYMSGNQLFLHGSPKFNVYETNFGFGKPVKVEMVHAFKGVSLAESGDGEGGLEFGLVLKSEEFEYFSSLIQQGLEVFKY* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2927 477 Gene3D - 252 475 IPR023213 -
Mtr3g2927 477 Pfam Transferase family 12 466 - -
Mtr3g2927 477 Gene3D - 9 241 IPR023213 -
Mtr3g2927 477 PANTHER - 7 477 - -
Mtr3g2927 477 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 7 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2927 Mtr-Chr3 43159585 43161167 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2927 13 468 Monolignol Biosynthesis Gene Families AT5G48930 23.126 5.53e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2927 - - aprc:113855905 527.324