Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2908 ATGTGCGGAATCTTAGCAGTGTTGGGTGTGGTCGACAATTCTCAGGCCAAACGCGCTCGCATCATCGAATTGTCTCGTAGGTTGCGACATAGAGGTCCTGATTGGAGTGGTTTGCATTGTCATCAAGATTGTTACCTCGCTCATCAACGTCTTGCTATTGTGGACCCTACTTCCGGAGATCAACCTCTTTACAACTATGACAAGACCGTTATTGTCACCGTTAATGGGGAGATATACAACCACAAGAAATTGAGGCAGAAACTGAAATCTCATCAATTTCGAACTGGTAGTGACTGTGAAGTCATTGCTCATCTTTATGAAGAATATGGTGAAGAGTTTGTTGATATGCTGGATGGGATGTTCTCATTTGTGCTTCTTGATACTCGAGATAAAAGTTTCATTGCTGCTCGTGATGCTATTGGCATTACCCCTCTTTACTTGGGTTGGGGCCATGATGGATCAATATGGTTTGCGTCTGAAATGAAAGCTCTGATTGACGATTGTGAGCAATTCATATCTTTTCCTCCAGGGCATATATATTCCAGCAAACAGGGAGGATTAAGAAGGTGGTATAATCCACCATGGTTCACAGAGAAAATTCCATCAACACGCTATGATCCAACGGTTTTGCGTGAGGCCTTTGAGAGGGCTGTAGTTAAGAGAATGATGACTGATGTACCCTTTGGAGTTCTTTTGTCCGGAGGACTGGACTCATCACTTGTTGCTGCAGTGGCCAATCGATATTTGGCTGATACCGATGCTGCCCGTCAGTGGGGATCACAGTTACATACTTTCTGCATTGGTATACAGGGCTCTCCGGATTTGAAAGCCGCAAAAGAGGTAGCAAATTATCTTGGCACTTGCCACCACGAACTTCATTTCACAGTTCAGGAAGGTATAGATGCACTGGAGGAAGTCATTTACCATATTGAAACATATGATGTAACAACTGTCAGAGCAAGTACTCCAATGTTTCTTATGTCCAGAAAAATCAAATCACTGGGAGTGAAAATGGTTCTGTCTGGAGAAGGTTCAGATGAAATATTTGGAGGTTACCTGTATTTCCATAAGGCGCCTAACAAGGAAGAGCTTCATCAAGAAACATGCCGAAAAATTAAAGCACTTCATCTTTATGACTGCCTGAGAGCCAATAAATCAACTTCGGCTTGGGGTATAGAGGCACGTGTACCGTTCTTGGATAAAGAATTTATCAACACTGCCATGGATATCGATCCGGAGTGGAAAATGATAAAGCCTGATATTGAAAGGATAGAGAAATGGGTATTGCGCAATGCATTTGATGATGATGAGAATCCATATTTGCCAAAGCACATATTGTACAGGCAGAAGGAACAGTTCAGTGATGGTGTCGGATACAGTTGGATTGATGGTTTGAAGGATCATGCTAACGAACAAGTCACAGATGCAATGCTGAAGCATGCCAACTTTGTTTACCCTGAAAATACCCCTACCACAAAAGAGGGATACCACTACAGGACAATTTTTGAGAAGTTATTTCCAAAGGGTGCTGCCAGGTCAACAGTTCCAGGAGGCCCTAGCGTGGCATGCAGTACTGCAAAAGCTGTGGAATGGGATGCAGCATGGTCCAAAAATCTTGACCCTTCTGGTCGTGCCGCGCTTGGCGTTCATGCAGCTGCATACAAGGATGCAGTAGATATCAAAATAGAAGAGCCCAACAATGGATCCCTCTAA 1713 0.4355 MCGILAVLGVVDNSQAKRARIIELSRRLRHRGPDWSGLHCHQDCYLAHQRLAIVDPTSGDQPLYNYDKTVIVTVNGEIYNHKKLRQKLKSHQFRTGSDCEVIAHLYEEYGEEFVDMLDGMFSFVLLDTRDKSFIAARDAIGITPLYLGWGHDGSIWFASEMKALIDDCEQFISFPPGHIYSSKQGGLRRWYNPPWFTEKIPSTRYDPTVLREAFERAVVKRMMTDVPFGVLLSGGLDSSLVAAVANRYLADTDAARQWGSQLHTFCIGIQGSPDLKAAKEVANYLGTCHHELHFTVQEGIDALEEVIYHIETYDVTTVRASTPMFLMSRKIKSLGVKMVLSGEGSDEIFGGYLYFHKAPNKEELHQETCRKIKALHLYDCLRANKSTSAWGIEARVPFLDKEFINTAMDIDPEWKMIKPDIERIEKWVLRNAFDDDENPYLPKHILYRQKEQFSDGVGYSWIDGLKDHANEQVTDAMLKHANFVYPENTPTTKEGYHYRTIFEKLFPKGAARSTVPGGPSVACSTAKAVEWDAAWSKNLDPSGRAALGVHAAAYKDAVDIKIEEPNNGSL* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2908 570 PIRSF Asn_synthetase_glu-h 356 516 IPR006426 GO:0004066|GO:0006529
Mtr3g2908 570 PIRSF Asn_synthetase_glu-h 1 361 IPR006426 GO:0004066|GO:0006529
Mtr3g2908 570 PANTHER ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING] 3 1 557 - -
Mtr3g2908 570 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 185 IPR017932 -
Mtr3g2908 570 Pfam Glutamine amidotransferase domain 48 165 IPR017932 -
Mtr3g2908 570 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 202 485 - -
Mtr3g2908 570 Gene3D HUPs 195 514 IPR014729 -
Mtr3g2908 570 TIGRFAM asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 366 IPR006426 GO:0004066|GO:0006529
Mtr3g2908 570 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 192 IPR029055 -
Mtr3g2908 570 PANTHER ASPARAGINE SYNTHETASE 1 557 - -
Mtr3g2908 570 CDD Asn_Synthase_B_C 211 456 IPR001962 GO:0004066|GO:0006529
Mtr3g2908 570 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 195 IPR029055 -
Mtr3g2908 570 Pfam Asparagine synthase 210 511 IPR001962 GO:0004066|GO:0006529
Mtr3g2908 570 CDD AsnB 2 192 IPR033738 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2908 Mtr-Chr3 42989483 42994310 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2908 2 164 PRT Gene Family AT4G34740 28.230 5.93e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2908 K01953 - gmx:732660 1065.06