Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2901 ATGTTTGTGGAAATGAACTTGCTGTTTCTTCTATTGTTACTTTTGGTTTGTGTGTGTTCTTTTGCACTTCCTCAGCTTGATTTACAAGAAGATGCACTATATGCATTGAAGTTATCTCTGAATGCTTCACCCAACCAGCTTACTAACTGGAACAAAAATCAAGTAAACCCTTGTACTTGGTCCAATGTTTACTGCGACCAGAACAGCAATGTTGTTCAAGTTTCGCTAGCATTTATGGGATTCGCTGGATCCTTGACACCTAGAATAGGAGCTCTAAAAAGTCTTACAACTCTTTCTTTACAGGGGAATAACATCATTGGAGACATACCAAAAGAATTTGGAAATCTTACAAGCTTAGTGAGATTGGATCTGGAAAACAACAAATTAACCGGTGAAATACCATCTTCCCTTGGTAATCTTAAAAAGCTTCAATTCTTGACATTAAGTCAAAATAATCTTAACGGGACAATTCCAGAATCACTTGGCAGTCTCCCAAACTTGATCAACATTCTGATAGATTCAAATGAACTTAACGGACAGATTCCAGAGCAGTTATTCAACGTTCCTAAGTTCAATTTCACTGGAAATAAGTTGAATTGTGGTGCGAGTTATCAGCATCTTTGCACATCTGATAATGCAAATCAAGGTTCATCACACAAACCAAAAGTAGGCCTCATTGTTGGAACAGTTGTAGGTTCAATTCTTATTCTTTTTCTTGGTAGCCTGCTGTTTTTCTGGTGCAAAGGGCACAGGCGTGATGTTTTTGTAGATGTTGCAGGTGAAGTTGATCGGCGAATTACACTTGGTCAAATAAAAAGTTTTTCCTGGAGAGAACTACAGGTAGCTACAGACAACTTCAGTGAGAAGAATGTTTTAGGACAGGGAGGCTTTGGTAAGGTTTATAAAGGTGTTTTAGTTGATGGGACAAAAATTGCTGTCAAAAGGCTAACTGATTATGAAAGTCCTGGGGGTGATCAAGCTTTCCAGCGCGAAGTTGAAATGATAAGCGTAGCTGTCCATAGGAACCTGTTACGGCTCATTGGGTTTTGCACTACTCCAACCGAACGCCTCTTAGTATATCCCTTCATGCAGAACTTAAGTGTTGCCTCTCGACTAAGAGAGCTCAAACCTGGGGAATCCATTTTGAATTGGGATACAAGAAAACGAGTTGCTATTGGAACAGCCCGTGGCCTTGAATATCTTCATGAACAATGCGATCCTAAAATTATTCATAGGGATGTAAAGGCAGCCAATATTTTACTAGATGGAGATTTTGAAGCAGTCGTTGGTGACTTTGGTTTGGCAAAATTGGTTGATGTTCGAAGGACTAATGTGACGACTCAAATTCGTGGGACAATGGGTCATATAGCTCCCGAATACCTGTCTACTGGAAAACCTTCAGAAAAGACAGATGTTTTTAGTTATGGGATTATGCTTTTGGAGCTTGTTACAGGTCAACGTGCAATTGACTTTTCACGTTTGGAAGATGAAGATGATGTGTTATTGCTTGACCATGTGAAGAAGCTACAAAGGGATAAAAGATTGGATGCTATTGTTGATAGCAACCTTAATAAAAACTACAACATAGAAGAAGTTGAAATGATAGTACAAGTTGCATTACTGTGCACACAAGCAACACCAGAGGATCGTCCGGCAATGTCAGAGGTTGTAAGAATGTTGGAGGGAGAAGGGCTGTCCGAAAGGTGGGAAGAATGGCAGCACGTGGAGGTTACTCGTAGACAAGACTCCGAGAGACTGCAAAGAAGATTTGCGTGGGGAGATGATTCAATTCATAACCAAGATGCGATCGAGTTGTCTGGTGGACGATGA 1830 0.4027 MFVEMNLLFLLLLLLVCVCSFALPQLDLQEDALYALKLSLNASPNQLTNWNKNQVNPCTWSNVYCDQNSNVVQVSLAFMGFAGSLTPRIGALKSLTTLSLQGNNIIGDIPKEFGNLTSLVRLDLENNKLTGEIPSSLGNLKKLQFLTLSQNNLNGTIPESLGSLPNLINILIDSNELNGQIPEQLFNVPKFNFTGNKLNCGASYQHLCTSDNANQGSSHKPKVGLIVGTVVGSILILFLGSLLFFWCKGHRRDVFVDVAGEVDRRITLGQIKSFSWRELQVATDNFSEKNVLGQGGFGKVYKGVLVDGTKIAVKRLTDYESPGGDQAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVASRLRELKPGESILNWDTRKRVAIGTARGLEYLHEQCDPKIIHRDVKAANILLDGDFEAVVGDFGLAKLVDVRRTNVTTQIRGTMGHIAPEYLSTGKPSEKTDVFSYGIMLLELVTGQRAIDFSRLEDEDDVLLLDHVKKLQRDKRLDAIVDSNLNKNYNIEEVEMIVQVALLCTQATPEDRPAMSEVVRMLEGEGLSERWEEWQHVEVTRRQDSERLQRRFAWGDDSIHNQDAIELSGGR* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2901 609 PANTHER LRR RECEPTOR-LIKE KINASE 5 609 - -
Mtr3g2901 609 Gene3D Transferase(Phosphotransferase) domain 1 363 580 - -
Mtr3g2901 609 ProSiteProfiles Protein kinase domain profile. 286 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2901 609 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Mtr3g2901 609 Gene3D Ribonuclease Inhibitor 27 210 IPR032675 -
Mtr3g2901 609 SMART LRR_typ_2 92 115 IPR003591 -
Mtr3g2901 609 SMART LRR_typ_2 140 164 IPR003591 -
Mtr3g2901 609 SMART LRR_typ_2 116 139 IPR003591 -
Mtr3g2901 609 Gene3D Phosphorylase Kinase; domain 1 255 362 - -
Mtr3g2901 609 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 5 609 - -
Mtr3g2901 609 Pfam Leucine rich repeat 94 153 IPR001611 GO:0005515
Mtr3g2901 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 409 421 IPR008271 GO:0004672|GO:0006468
Mtr3g2901 609 SMART serkin_6 286 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2901 609 SUPERFAMILY Protein kinase-like (PK-like) 266 561 IPR011009 -
Mtr3g2901 609 SUPERFAMILY L domain-like 30 199 - -
Mtr3g2901 609 ProSitePatterns Protein kinases ATP-binding region signature. 292 314 IPR017441 GO:0005524
Mtr3g2901 609 Pfam Protein kinase domain 287 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2901 Mtr-Chr3 42920466 42928168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2901 12 609 Receptor kinase-like Gene Family AT5G10290 74.086 0.0 895
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mtr3g2901 Pkinase 3.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2901 - - gmx:100786654 1010.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2901 3 42920466 42928168 Mtr8g2762 8 38276055 38283197 PCT