Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2870 ATGTTAGGAGAAGAGGATAAGGAGAAAAAACTCTCCATCAGGAGAACCTATTCACGTTCAGTTTCATGGACAGATCGTTCTCCAAATAGCCATAAACCACCACTAGGAAATAGTAAACCAAGACCACTTTTACCACCTCTTCAACCTCTTTCAATCAATAAACGTAGCGTTGAAGAATGGCCAAGTGCTGGATCTGATGATCTTGGTGTTTGGCCTCTTCCACAGACTCCAAGAGGGTCTATTACAATCAATGAACCTACCAAAGATTTTCAGTTCAAAAGAGATAAATTAGCTTTCTTTGACAAAGAGTGTTCAAGAATTGCTGAACATATTTACTTGGGAAGTGACACAGTGGCCAAAAACCATGAACTTCTCAGAGAAAAAGGAATAACACATGTGCTTAACTGTGTTGGTTTTGTTTGTCCCGAGTATTTCAAAAGTGATTTTGAGTACAAAACACTTTGGTTGCAGGACAGTCCAACTGAAGATATAACAAGTATTCTCTATGATGTGTTTGATTACTTTGAGGATGTTAGAGAACAAGGTGGTCGTGTTCTTGTTCATTGTTGTCAAGGGGTTTCGCGATCAACGGCTTTGGTGATAGCTTATCTCATGTGGAGGAAGGGACAGAGCTTTGAAGATGCTTTTCAGTTTGTTAAAACTGCAAGGGGAGTCACAAATCCAAACATGGGTTTTGCTTGTCAACTCTTGCAGTGTCAGAAACGTGTACATGCTATGCCTGCAAGTCCTAATTCTGTTTTAAGGATGTATCGAATGGCTCCTCACTCTCCTTATGACCCTCTTCATCTTGTTCCTAAGATGGTTAACCAACCAGGTTCACTAGCACTTGATTCGCGTGGTGCTTTTATTGTTCATGTTCCTTCTGCTATCTATGTGTGGATTGGGAAAAATTGTGACTTGGTTATGTCATGCAACGCAAAGAGTGCGGCTTTTCAGGTTGTGCGCTATGAGGGAGCAAAGGGTCCAATTTTGAGCATCCGTGAAGATCAAGAATCAGCTGAGTTTTGGATTGCTCTTTCTGATCAGCAACGTTTGTCAGGTGATTCTGATAAACAACTGGTTTTGCCTACTGAAAAGATGGAGATTGGTCTAAGAAAAGTTGATGCTTATGATTTGGATTTTGAGATTTTCCACAAGGCAATTTCTGGTGGGGTTGTTCCACCTTTTTCTGTAGCTAATTCTGGATCAGAAACTTCTCTTCCTGCTACAGAACATGGTTGGGCAAGATTGAGGAGGAAATTTGCTAGTGGTGTCATGAAAGAAATCTTAACATCTCCCAAATGGAAGTGTGATGTGATTATGGAGGAAGAAAAACAAGATTTTGCAGCTGATGATGATCCCTTGTCAGCGTCGCCGTCATCAAGTCATCCAAGTGACTGTGGTTCTCCAGATTCTTTTGAATGTTATCCGAACAGCTTAAGCAAGGCAAAAGATACTGATGAAGCCATGGACTTGTCTGAATCTGATTCTGGTGTTGCTTCTTTGATGCCACTATCTCCTTGTGGCACTTCTTTTCCTTGTTGTTTTCCAAGCAGCAGCCCAAGATTCAATTCCAAGTCGCCAACACTTTCACCTTCAAGTTCTGATTATGCGAGTTCGTTTACATTTTCGCCTTCCTCTACCAATTGGTCTGACTTGTCATTCATGTCTTCTCGGCAGCCATCACCATCCGGCCAGGAATCAATTGAACCCTTGTATGTTAAAGACGTGTCTTTCTCAACAATACTTAGCAAAGAAGTTCTCTCTTCACCTTCGGAGTCATTTTCGACTGATGATACTTTAGGAGGGGAAAACTCCCATTTGTCATCGAAAGGGTCTTTTTTCTCTATTGCTGAGCGTAGAGGGAGTAGTATACCGCCTCGGATGATGCTACCCTCAGTCAATGAATCCTCTAAGGTCCGTAAGAACCTGGAGGAATGCACCTACTAA 1950 0.4169 MLGEEDKEKKLSIRRTYSRSVSWTDRSPNSHKPPLGNSKPRPLLPPLQPLSINKRSVEEWPSAGSDDLGVWPLPQTPRGSITINEPTKDFQFKRDKLAFFDKECSRIAEHIYLGSDTVAKNHELLREKGITHVLNCVGFVCPEYFKSDFEYKTLWLQDSPTEDITSILYDVFDYFEDVREQGGRVLVHCCQGVSRSTALVIAYLMWRKGQSFEDAFQFVKTARGVTNPNMGFACQLLQCQKRVHAMPASPNSVLRMYRMAPHSPYDPLHLVPKMVNQPGSLALDSRGAFIVHVPSAIYVWIGKNCDLVMSCNAKSAAFQVVRYEGAKGPILSIREDQESAEFWIALSDQQRLSGDSDKQLVLPTEKMEIGLRKVDAYDLDFEIFHKAISGGVVPPFSVANSGSETSLPATEHGWARLRRKFASGVMKEILTSPKWKCDVIMEEEKQDFAADDDPLSASPSSSHPSDCGSPDSFECYPNSLSKAKDTDEAMDLSESDSGVASLMPLSPCGTSFPCCFPSSSPRFNSKSPTLSPSSSDYASSFTFSPSSTNWSDLSFMSSRQPSPSGQESIEPLYVKDVSFSTILSKEVLSSPSESFSTDDTLGGENSHLSSKGSFFSIAERRGSSIPPRMMLPSVNESSKVRKNLEECTY* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2870 649 ProSiteProfiles Dual specificity protein phosphatase domain profile. 103 245 IPR020422 GO:0006470|GO:0008138
Mtr3g2870 649 MobiDBLite consensus disorder prediction 1 15 - -
Mtr3g2870 649 Pfam Dual specificity phosphatase, catalytic domain 111 241 IPR000340 GO:0008138|GO:0016311
Mtr3g2870 649 MobiDBLite consensus disorder prediction 1 48 - -
Mtr3g2870 649 CDD DSP 104 238 - -
Mtr3g2870 649 MobiDBLite consensus disorder prediction 448 471 - -
Mtr3g2870 649 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 93 245 IPR029021 -
Mtr3g2870 649 ProSitePatterns Tyrosine specific protein phosphatases active site. 187 197 IPR016130 GO:0016311|GO:0016791
Mtr3g2870 649 SMART dsp_5 103 242 IPR020422 GO:0006470|GO:0008138
Mtr3g2870 649 Gene3D Severin 256 353 IPR029006 -
Mtr3g2870 649 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 162 223 IPR000387 GO:0016311|GO:0016791
Mtr3g2870 649 MobiDBLite consensus disorder prediction 455 471 - -
Mtr3g2870 649 MobiDBLite consensus disorder prediction 16 34 - -
Mtr3g2870 649 PANTHER MKPA PROTEIN 1 639 - -
Mtr3g2870 649 MobiDBLite consensus disorder prediction 591 610 - -
Mtr3g2870 649 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 1 639 - -
Mtr3g2870 649 SUPERFAMILY Actin depolymerizing proteins 249 353 - -
Mtr3g2870 649 Gene3D Protein tyrosine phosphatase superfamily 83 245 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2870 Mtr-Chr3 42666569 42670660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2870 27 139 Protein tyrosine phosphatase (PTP) family AT3G55270 50.794 6.51e-32 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2870 - - gmx:100775448 898.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3085 8 41428215 41430900 Mtr3g2870 3 42666569 42670660 PCT