Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2864 ATGGGAAACAAAGGTGGATTTTTACGTTATGCAGATGGTGTTGACAAGTTGCTATTATTCTTTGGAACTTTGGGTTGCATTGGTGATGGCATACAAACTCCACTCACTATGCTTGTTCTTGGCAGTTTGATAGATGATTATGCTCGTGGTGGTTCTGAACATATTGTGTCCATTCATAATATCAACAAGTATGCTCTCAAGCTACTTGGTATTGCCCTTGGAGTTGCTTTTTCTGCTTTTATTGTTGGAGTATGCTGGACAAGAACTGCAGAAAGACAAACTTCGCGGATGAGGATTGAATATCTAAAATCAATCCTAAGACAAGAAGTTGGTTTCTTTGACAAGCAAACTAACTCTTCTACAACCTTCCAAGTAATTGCCACCATAACTTCTGATGCTCAAACAATCCAAGACACCATGTCTGATAAGGTTCCTAATTGTCTTGTTCATCTCTCAGCATTTTTCTCTAGCTTTATAGTGGCACTCTTCCTCTCCTGGAGACTTGCAGTAGCTGCTTTTCCATTTTCAATTATGATGATCATGCCAGCACTCATATTTGGAAATGCTATGAAAGAGCTGGGTGGTAAAATGAAGGATGCATTCGGAGTTGCTGGTAGCATAGCAGAACAAGCAATCTCATCGGTTCGAACTGTTTACTCGTACGTAGGTGAGAAGCAAACACTGAAGAGATTCAGTTCTGCTCTTGAAACATGTATGCAGCTTGGCATAAAGCAAGGTCAGACAAAGGGAGTGGTTGTTGGAAGTTTTGGGTTGTTATATGCTACCTGGGCATTCCAATCTTGGGTTGGAAGTGTTCTGGTTAGGACCAAAGGAGAAAAGGGTGGCAAGGTGTTTTGTGCTGAAATATGTATTATTTGGGGAGGATTGTCTCTGATGAGTGCACTACCAAATCTGGCTTCCATATTAGAGGCGACAATAGCAGCTACGCGGATTTTCGAGATGATTGACAGAAAGCCAACCATAAACTCTACAAAAGAAAAAGGAAGGATTTTGAAGCATACAAGAGGAGAGATTACATTTAAAGATGTTGAGTTTAGTTACCCTTCAAGGCCAGATACCCTGATTCTCCAAGGACTCAATCTTAAAGTTCAGGCATGTAAAACAGTGGGCCTGGTTGGAGGAAGTGGTTCTGGAAAATCTACTATAATCTCTTTGCTTGAAAGATTCTATGATCCTACATGTGGTGAGATATTGCTTGATGGTTTTGACATAAAAAGACTACACCTTAAGTGGTTTAGGTCCCTGATAGGATTGGTAAATCAAGAGCCAATTCTATTTGCAACTTCCATAAGAGAGAACATTCTATTTGGAAAGGAAGGAGCTTCAATGGAAGATGTCATAACCGCAGCAAAAGCAGCGAATGCACATGATTTCATTGTCAAACTTCCAAATGGCTATGAAACTCAAGTAGGACAACTAGGAGCTCAATTGTCTGGAGGACAAAAACAAAGGATTGCTATTGCAAGGGCTTTAATAAGAGATCCTAAAATTCTACTACTTGATGAAGCCACCAGTGCTTTGGATTCACAATCTGAAAGAGTGGTACAAGATGCACTTGACTTGGCTTCTAGAGGTAGAACAACAATCATCATCGCTCATCGCCTTTCCACGATTCGTAAGGCTGATTCAATAGTAGTTCTTCAATCAGGAAGGGTGGTTGAAAGTGGTTCTCACAATGAGCTACTCCAACTGAACAATGGACAAGGTGGGGTTTACACCGAAATGCTAAATTTGCAGCAAACAAGTCAAAATGAAAATGCACAGCATCAAATAAACAAGAGCCCTCGTGCAATGGAAAATCCAATAACAAGTTCAAATCCAAGCCGGAAAAGTACTCCAATTCATCATGCATTTAGCCCTGCACAACCATTTAGTCCCATATATTCAATCAGTGTTATCGGCTCTAGCTTTGATGATGACTACAGCAGTGAAAACGTGGAGAAACCTTACAAATCAAACATCTCTCACTGGCGTTTGCTACAAATGAATGCTCCTGAGTGGAAGTATGCTTTGTTTGGATGTTTAGGGGCCATTGGCTCAGGAATATGCCAACCATTTTATTCCTATTGCTTAGGAATAGTTGCTTCTGTCTATTTCATTGATGATAATGCTCGGATCAAATCACAAATCAGGTTGTACTCAATCATCTTCTGCTGCATATCGGCTGTGAACTTCGTCTCAGGCCTCATTCAGCATCACAATTTTTCCATCATGGGAGAGCGTTTGCTGAAAAGGGTGCGAGAGAATTTGCTCGAGAAAGTGTTAACCTTTGAGATAGGATGGTTTGATCAAGAGGAGAACACAAGTGCAGTAATCTGTGCACGCTTGGCGACCGAAGCTAACTTGGTTCGATCCCTCGTTGCAGAAAGAATGTCGTTGTTAGTTCAAGTCTCCGTTACTGCATTGCTGGCTTTTGTACTTGGTTTAATCGTTACATGGAGGGTAGCTATTGTCATGATTGCTATGCAGCCTTTGATCATTTCATGTCTCTATTCAAAAACCGTTCTCATGAAGAGTATGTCAGGAAAAGCAAAAAATGCTCAAAGAGATGCTAGTCAATTAGCAATGGAAGCTACTACCAACCACAGGACTATCGCCGCATTCTCATCTGAGAAAAGGATACTAAATTTGTTCAAAACTGCTATGGATGGCCCTAAGATGGAAAGCATCAAGCAATCATGGATTTCAGGTTCCATATTGTCTATGTCACAGTTCATAACAACAGCATCTATAGCTTTGACTTTTTGGTACGGAGGCATATTATTAAATCGTAAACAAGTCGAATCAAAGCAACTCTTGCAAGTTTTCCTCATTTTGATGGGAACTGGTAGACAAATTGCTGATACAGGAAGCATGACTTCTGACATAGCTAAAAGTGGAAAAGCCATTAGTTCAGTATTTGCAATACTGGATAGGAAAACTCAGATTGAACCTGAAGATACTAGACACACAAAGTTTAAAAAGAGTATGAAGGGTGATATAAAACTGAAAGATGTGTTTTTCTCATATCCTGCAAGGCCAGACCAAATGATTCTCAAGGGTCTCAGTCTTGAGATTGAAGCCGGCAAAACAATTGCATTAGTCGGACAAAGTGGCTCAGGAAAATCCACCATCATTGGCTTAATTGAAAGATTTTATGACCCTATTAAGGGATCCATATTCATAGACAATTGTGACATCAAAGAACTTCATTTGAAAAGTTTGAGATCACATATTGCATTGGTGAGTCAAGAGCCTACACTCTTTGCTGGAACCATACGCGACAACATTGTATACGGGAAGGAAGATGCATCAGAGGCTGAAATAAGAAAAGCCGCACGTCTTGCAAATGCTCATGACTTTATAAGTGGAATGAGAGAAGGGTATGATACATACTGTGGAGAAAGAGGAGTGCAGCTATCAGGAGGACAGAAGCAAAGGATAGCAATAGCTAGAGCAATGTTGAAGAATCCACCAATACTTCTGTTAGATGAGGCAACAAGTGCTCTTGACAGTGTATCAGAGAATCTTGTACAAGAAGCATTGGAGAAAATGATGGTTGGAAGAACATGTGTAGTTATAGCTCACCGTTTGTCAACAATACAAAGTGTTGATTCCATAGCTGTGATTAAAAATGGAAAGGTGGTGGAACAAGGTTCTCATTCACAGTTACTGAATGATAGATCAAATGGGACTTATTACTCTTTAATTAGGCTACAACAAAGTCATTCAACTTGA 3738 0.4013 MGNKGGFLRYADGVDKLLLFFGTLGCIGDGIQTPLTMLVLGSLIDDYARGGSEHIVSIHNINKYALKLLGIALGVAFSAFIVGVCWTRTAERQTSRMRIEYLKSILRQEVGFFDKQTNSSTTFQVIATITSDAQTIQDTMSDKVPNCLVHLSAFFSSFIVALFLSWRLAVAAFPFSIMMIMPALIFGNAMKELGGKMKDAFGVAGSIAEQAISSVRTVYSYVGEKQTLKRFSSALETCMQLGIKQGQTKGVVVGSFGLLYATWAFQSWVGSVLVRTKGEKGGKVFCAEICIIWGGLSLMSALPNLASILEATIAATRIFEMIDRKPTINSTKEKGRILKHTRGEITFKDVEFSYPSRPDTLILQGLNLKVQACKTVGLVGGSGSGKSTIISLLERFYDPTCGEILLDGFDIKRLHLKWFRSLIGLVNQEPILFATSIRENILFGKEGASMEDVITAAKAANAHDFIVKLPNGYETQVGQLGAQLSGGQKQRIAIARALIRDPKILLLDEATSALDSQSERVVQDALDLASRGRTTIIIAHRLSTIRKADSIVVLQSGRVVESGSHNELLQLNNGQGGVYTEMLNLQQTSQNENAQHQINKSPRAMENPITSSNPSRKSTPIHHAFSPAQPFSPIYSISVIGSSFDDDYSSENVEKPYKSNISHWRLLQMNAPEWKYALFGCLGAIGSGICQPFYSYCLGIVASVYFIDDNARIKSQIRLYSIIFCCISAVNFVSGLIQHHNFSIMGERLLKRVRENLLEKVLTFEIGWFDQEENTSAVICARLATEANLVRSLVAERMSLLVQVSVTALLAFVLGLIVTWRVAIVMIAMQPLIISCLYSKTVLMKSMSGKAKNAQRDASQLAMEATTNHRTIAAFSSEKRILNLFKTAMDGPKMESIKQSWISGSILSMSQFITTASIALTFWYGGILLNRKQVESKQLLQVFLILMGTGRQIADTGSMTSDIAKSGKAISSVFAILDRKTQIEPEDTRHTKFKKSMKGDIKLKDVFFSYPARPDQMILKGLSLEIEAGKTIALVGQSGSGKSTIIGLIERFYDPIKGSIFIDNCDIKELHLKSLRSHIALVSQEPTLFAGTIRDNIVYGKEDASEAEIRKAARLANAHDFISGMREGYDTYCGERGVQLSGGQKQRIAIARAMLKNPPILLLDEATSALDSVSENLVQEALEKMMVGRTCVVIAHRLSTIQSVDSIAVIKNGKVVEQGSHSQLLNDRSNGTYYSLIRLQQSHST* 1246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2864 1245 PANTHER OS04G0481700 PROTEIN 11 1242 - -
Mtr3g2864 1245 SUPERFAMILY ABC transporter transmembrane region 7 326 IPR036640 GO:0005524|GO:0016021
Mtr3g2864 1245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 993 1240 IPR027417 -
Mtr3g2864 1245 SMART AAA_5 372 558 IPR003593 -
Mtr3g2864 1245 SMART AAA_5 1028 1214 IPR003593 -
Mtr3g2864 1245 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 20 310 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr3g2864 1245 CDD ABC_MTABC3_MDL1_MDL2 1001 1240 - -
Mtr3g2864 1245 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 11 1242 IPR039421 -
Mtr3g2864 1245 Pfam ABC transporter transmembrane region 20 276 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr3g2864 1245 Pfam ABC transporter transmembrane region 679 946 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr3g2864 1245 CDD ABC_6TM_Pgp_ABCB1_D2_like 667 983 - -
Mtr3g2864 1245 CDD ABC_6TM_Pgp_ABCB1_D1_like 19 318 - -
Mtr3g2864 1245 Gene3D - 986 1244 IPR027417 -
Mtr3g2864 1245 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 345 581 IPR003439 GO:0005524
Mtr3g2864 1245 Gene3D - 343 599 IPR027417 -
Mtr3g2864 1245 ProSitePatterns ABC transporters family signature. 1140 1154 IPR017871 GO:0005524
Mtr3g2864 1245 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1001 1237 IPR003439 GO:0005524
Mtr3g2864 1245 MobiDBLite consensus disorder prediction 589 622 - -
Mtr3g2864 1245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 336 586 IPR027417 -
Mtr3g2864 1245 SUPERFAMILY ABC transporter transmembrane region 664 984 IPR036640 GO:0005524|GO:0016021
Mtr3g2864 1245 Pfam ABC transporter 1019 1168 IPR003439 GO:0005524
Mtr3g2864 1245 Pfam ABC transporter 363 512 IPR003439 GO:0005524
Mtr3g2864 1245 CDD ABC_MTABC3_MDL1_MDL2 345 586 - -
Mtr3g2864 1245 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 678 965 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr3g2864 1245 Gene3D ABC transporter type 1, transmembrane domain 67 974 IPR036640 GO:0005524|GO:0016021
Mtr3g2864 1245 ProSitePatterns ABC transporters family signature. 484 498 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2864 Mtr-Chr3 42599751 42605652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2864 653 1245 Calmodulin-binding Proteins AT2G36910 38.500 5.84e-116 390