Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2854 ATGTCGGCTCTGTTACCTTGCACGCCGACTATACTCTCTGCTCCGTTCGGAAACCGGAGCAGAACCAATCATCTTCCCCTTCGACCTCACTCCCACGCCCTCCCAGGCTCGACCAAACGCTTTCTTCGTGGTTCTCTTTCCGTTACCCGTTTCGGTTTTCATCCCGGTTTTTTACCCGAGCCGGAAGATGCTGAATTCGTTCTCAGGGAATTGTTTAACCGAGCAGAGGGTTTTCTTTACACAATTGCAGATGCTGCTGTTTCGTCTTCTGATATAGCGATAACAACTACCACAGCGAAACAGAATAATGATTGGTTTTCTGGAATTACCAATTACATGGAAATTATTCTCAAGGTACTCAAGGACGGGCTTTCTACTTTGCATGTGCCGTATGCTTATGGTTTTGCAATTATAATGCTCACTATTCTTGTAAAAGTTGCCACGTTTCCGTTGACAAGAAAACAGGTAGAATCTGCCATGGCTATGCGATCTTTGCAACCTCAAGTAAAGGCTATCCAGAAACAGTATGCCAGGGATCAGGAGAGAATTCAACTTGAAACTGCCCGGTTATATACATTAGCCAACATTAATCCTCTAGCAGGATGCCTGCCTGTTCTCTTAACAACACCAGTGTGGATCGGGCTATATCGAGCCTTTTCTAATGTGGCTGATGAGGGACTCCTTAATGAAGGCTTCTTTTGGATACCTTCTCTTTCTGGTCCAACTACAATTGCAGCTCGGCAAAACGGAAGTGCTATCTCATGGCTTTTTCCTTTTGTGGATGGTCACCCTCCCCTTGGATGGCCAGATACATTGGCTTACCTTGTCTTGCCTGTTTTGCTGGTTGTCTCTCAATACATTTCTCTCCAGATAATGCAGTCATCACAGGCTACTGGTCCCAATGCGAAGAGTTCTCAAGTCTTAAACAAGGTCCTTCCGTTAGTGATTGGTTATTTTGCTCTTTCAGTTCCTTCAGGTCTTAGCCTTTACTGGTTCACAAATAATATATTGAGCACTTTACAGCAAATATGGCTTCAAAAGTTAGGAGGTGCGAAAAATCCTTTGAGACAAGTTCTTGATGATAATGTGAAAAATGTAGACCTAATGCAGGTTCAAAAGTCAGTATCGAATCTAAATTCCACAAAAATTGAAGAAGCTAGAAAAGATTCAAAATTGACATCAGAAGGGCCACGACCTGGTGACAAATTTAAGCAATTAATGGAGCAAGAGGCAAAAAAGAAACAGCAGAGAGAAGAAGAAAAAAGGAAGGCCGAGGAAGCAGCAGCTAAAGCTAATAATCACGAACAAACAGTTGAAGGAGGAAACCAAGTTGTAAACGACTTAGTTAAAAATTCCCAATCTGTGGCTGATGATACTGATCCATCTATATCTGGAGTAATAAATGGTAATGGTAAGGACTTGGAGGGAAATCAGAATTCTACATCTACATCTGATACTGCAAATGATGAAGGTTCTGCTCATTTGAATGCAGTAAACAAGAAAAATCTAGAAAAGGAATCAAGAGAAGTATTGTCAACCAGAGTTACTACAAACAAGCAAGCTCATGGAGAAGACTCAGATCGCGTGTCAAAGGATTGA 1599 0.4203 MSALLPCTPTILSAPFGNRSRTNHLPLRPHSHALPGSTKRFLRGSLSVTRFGFHPGFLPEPEDAEFVLRELFNRAEGFLYTIADAAVSSSDIAITTTTAKQNNDWFSGITNYMEIILKVLKDGLSTLHVPYAYGFAIIMLTILVKVATFPLTRKQVESAMAMRSLQPQVKAIQKQYARDQERIQLETARLYTLANINPLAGCLPVLLTTPVWIGLYRAFSNVADEGLLNEGFFWIPSLSGPTTIAARQNGSAISWLFPFVDGHPPLGWPDTLAYLVLPVLLVVSQYISLQIMQSSQATGPNAKSSQVLNKVLPLVIGYFALSVPSGLSLYWFTNNILSTLQQIWLQKLGGAKNPLRQVLDDNVKNVDLMQVQKSVSNLNSTKIEEARKDSKLTSEGPRPGDKFKQLMEQEAKKKQQREEEKRKAEEAAAKANNHEQTVEGGNQVVNDLVKNSQSVADDTDPSISGVINGNGKDLEGNQNSTSTSDTANDEGSAHLNAVNKKNLEKESREVLSTRVTTNKQAHGEDSDRVSKD* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2854 532 PANTHER OXA1 43 467 IPR001708 GO:0016021|GO:0032977
Mtr3g2854 532 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 133 347 IPR028055 -
Mtr3g2854 532 Coils Coil 403 437 - -
Mtr3g2854 532 Pfam 60Kd inner membrane protein 133 347 IPR001708 GO:0016021|GO:0032977
Mtr3g2854 532 MobiDBLite consensus disorder prediction 379 532 - -
Mtr3g2854 532 MobiDBLite consensus disorder prediction 382 432 - -
Mtr3g2854 532 PANTHER BNAA09G28180D PROTEIN 43 467 - -
Mtr3g2854 532 MobiDBLite consensus disorder prediction 435 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2854 Mtr-Chr3 42469184 42475344 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2854 63 421 Chloroplast and Mitochondria Gene Families AT2G28800 51.247 1.45e-122 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2854 K03217 - gmx:100802546 723.005