Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2850 ATGGATCTGCCTCATAATTTCTTCCTACTAGCAACAGCCCTCTTAGGATTCATTTCTGTATGCAAATTCTTTTTCCATTTTTTCAACTGGATATGGATCATGTTCTTAAGACCACACAAAAAACTCATAGACTATGGTTCATGGGCTATAATCACCGGCTCCACCGATGGAATAGGCAAAGCCATGGCTTTTGAGTTTGCATTAAAGGGACTCAACATTCTCTTAGTTGGTAGAAGCCCTCTTAAGCTTGAGGCAACATCAAAAGAGATTATAGATAAAACTTTTGGAAATGTTGAAGTCAAATCTGTTGTTGTAGACTTGCAAAATAATAGTGGAGAGGAAATAATGAATAAGGTTGAAGAAGCTATAGATGGTTTAGATGTTGGAATTTTAGTTAATGGTGCTGGTGTGGCTTATCCTTATGCTAGATTTTTTCATGAGGTTGATTTGGATTTGATGGATACTATTATCAAAGTGAATGTTGAAGGAACAACTTGGATTACTAAAGCTGTGCTTCCTAGTATGATTAAGAACAAAAAAGGAGCTATTATTAACATTGGTTCTGGTTCCACTGTTGTGATTCCTTCATATCCTCTTGTCACACTTTATGCAGCTTCAAAAGCATATCTTGCAATGTTCTCTGCATGCACTAATTTGGAATACAAGCAGCTAGGAATCGACATCCAGTGTCAGGTACCATTATTTGTGTCAACAAAAATGACAAGGATGAGGGCATCACTTTTTGTTCCAACACCAGATAAATACAGCAAAGCATGCACAAAATGGATTGGCTATGAAAAATTGGTTGTACCTTACCTCTTTCACAATCTGCAGTCATTTCTCATAAGGAAAATTCCTGATGTATTCTTGGATTCCTACATGTTGCGTAATTTGCTTTACATGCGTAAAAGAGGGCTCATCAAGGACTCCCAAATCAAAGGATCAAAAGCATCTAGTAATTCTAAAACAAATTAA 975 0.3651 MDLPHNFFLLATALLGFISVCKFFFHFFNWIWIMFLRPHKKLIDYGSWAIITGSTDGIGKAMAFEFALKGLNILLVGRSPLKLEATSKEIIDKTFGNVEVKSVVVDLQNNSGEEIMNKVEEAIDGLDVGILVNGAGVAYPYARFFHEVDLDLMDTIIKVNVEGTTWITKAVLPSMIKNKKGAIINIGSGSTVVIPSYPLVTLYAASKAYLAMFSACTNLEYKQLGIDIQCQVPLFVSTKMTRMRASLFVPTPDKYSKACTKWIGYEKLVVPYLFHNLQSFLIRKIPDVFLDSYMLRNLLYMRKRGLIKDSQIKGSKASSNSKTN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2850 324 Gene3D - 44 273 - -
Mtr3g2850 324 CDD 17beta-HSD1_like_SDR_c 46 286 - -
Mtr3g2850 324 PANTHER RH59310P 6 311 - -
Mtr3g2850 324 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 137 IPR002347 -
Mtr3g2850 324 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 181 189 IPR002347 -
Mtr3g2850 324 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 203 222 IPR002347 -
Mtr3g2850 324 PRINTS Glucose/ribitol dehydrogenase family signature 48 65 IPR002347 -
Mtr3g2850 324 PRINTS Glucose/ribitol dehydrogenase family signature 126 137 IPR002347 -
Mtr3g2850 324 PRINTS Glucose/ribitol dehydrogenase family signature 175 191 IPR002347 -
Mtr3g2850 324 PRINTS Glucose/ribitol dehydrogenase family signature 203 222 IPR002347 -
Mtr3g2850 324 PRINTS Glucose/ribitol dehydrogenase family signature 224 241 IPR002347 -
Mtr3g2850 324 Pfam short chain dehydrogenase 48 242 IPR002347 -
Mtr3g2850 324 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 46 308 IPR036291 -
Mtr3g2850 324 PIRSF 11-beta-HSD1 2 308 - -
Mtr3g2850 324 PANTHER ENOYL-(ACYL CARRIER) REDUCTASE 6 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2850 Mtr-Chr3 42447956 42450414 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2850 8 313 Lipid Metabolism Gene Families AT1G67730 49.837 2.06e-108 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2850 K10251 - gmx:100816067 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3024 8 40902541 40905888 Mtr3g2850 3 42447956 42450414 PCT