Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2838 ATGAAGTTAGAAGTTGAAATAATCTCCAAAGAAATCATCAAACCTTCTTCTCCAACTCCATCCCATCTTCGCCATTACCAACTCTCCTTTCTCGACCAAATCGCGCCTATGGTTTATAACCCTATCGTCCTCTTCTACTCTCACAACGACGCACTCAACACAGCCACCATATCCAACACTCTCAAAAAATCCCTATCAAAAATCTTAACTCATTTCTACCCTCTTGCGGGAAGAATGAACAACAAAAACTTCATAGACTGCAATGACGAAGGAATCCCTTACATAGAAACAAAAATCACAAACTACAATCTCAAAGACATTATTCAAAATCCAATCCCAAATGAACTCAACCGTTTGATTCCATTTCAACTTGACGATATCACAAACATCGCTTTCGGTATTCAACTCAATTTTTTTAGCTGTGGTGGAATTGCAATCGGTGCTTGTCTTTCACATCAAATAGCTGATGGTTTATCATTTTTCAATTTCCTCAATAGTTGGGCAAATATTACTAGAAAATTGATTTTTCCAAAACCTATTTTTGATTCTTCTAAGCTTTTCCCGCCCAAAAATATTTCGGGATTTGACCCTAGAAGTGGTATCGCCAAAGAAAATATAGTTTGCAAAATTTTTGTTTTTAATGCTGACGTGGTTGAAAATCTAAGAGCAAAATATATTAATTTTAATCCTACACGCGTTGAGGCTTTATCGGCTTTTATTTGGAGTCGTTATGTTGATGTTATTTATAATGATGGTGTGCAAAGAAACTATGGTGTGGTTCATGCGGTGAATTTGCGCCAAAAAATGGAACCACCATTACCTTTAGAATCGTTTGGTAACTATTTGCGATTTACAATAACGATTCCGAAGATGAATAGTGGAGAAGAGTGTTACGGGTTAGCGAAGCAAGTGAGAGATGAGATAAAGAAGATTGATAAAGAATATGTGAAGAAGGTTCAAGAAGGTAAGGAGCATTTGGAATTTCTTAAGGAAAGTTTTGATAGAGTGATTGTGAAGGAGGAATTGGTTGTGTTTAATTTTACCAGTTTGTGTAGGTTTCCTTTGTATGATGCTGATTTTGGTTGGGGGAAACCTATTTGGGTTGGTTCAACTGCTTTGAATTTTAAGAATTTGGTTGTGTTTGTTGATTGTAAGGATGGGGGTGGTATTGAGGCCTATGTTAGCTTGAAGGTTGAGGATATGGTTAAGTTTGAAGCTGATTTGGAGTTACTTGCATGTGTGAATAAATGA 1251 0.3645 MKLEVEIISKEIIKPSSPTPSHLRHYQLSFLDQIAPMVYNPIVLFYSHNDALNTATISNTLKKSLSKILTHFYPLAGRMNNKNFIDCNDEGIPYIETKITNYNLKDIIQNPIPNELNRLIPFQLDDITNIAFGIQLNFFSCGGIAIGACLSHQIADGLSFFNFLNSWANITRKLIFPKPIFDSSKLFPPKNISGFDPRSGIAKENIVCKIFVFNADVVENLRAKYINFNPTRVEALSAFIWSRYVDVIYNDGVQRNYGVVHAVNLRQKMEPPLPLESFGNYLRFTITIPKMNSGEECYGLAKQVRDEIKKIDKEYVKKVQEGKEHLEFLKESFDRVIVKEELVVFNFTSLCRFPLYDADFGWGKPIWVGSTALNFKNLVVFVDCKDGGGIEAYVSLKVEDMVKFEADLELLACVNK* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2838 416 Pfam Transferase family 4 410 - -
Mtr3g2838 416 Gene3D - 203 414 IPR023213 -
Mtr3g2838 416 PANTHER ANTHRANILATE N-BENZOYLTRANSFERASE 2 415 - -
Mtr3g2838 416 Gene3D - 1 194 IPR023213 -
Mtr3g2838 416 Coils Coil 301 321 - -
Mtr3g2838 416 PANTHER F21J9.9 2 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2838 Mtr-Chr3 42366168 42373645 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2838 3 405 Monolignol Biosynthesis Gene Families AT5G48930 26.923 1.90e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2838 K13065 - gmx:102670206 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2838 3 42366168 42373645 Mtr3g2838 3 42366168 42373645 ECH