Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2834 ATGTATTTATCATCAGAGAAGCCGCGCCCAATCGATTTCTACAAAGAAGAAGCACGCGACATGATGATGGAAGTAGTAACCAACACCGATCTTCAGCCACCACCACCTCCACCGTCGCAACACCACCACCACCTTCAACAACAACAACCGCAAATGATTCTCACCGCCGAGAGCAGCGGCGACGATCCTGAGATGGAGATCAAAGCTCCAAAGAAACGCGCGGAAACCTGGGTTCAAGACGAGACACGAAGCCTCATTGGTCTACGACGCGAGATGGATTCATTATTCAACACTTCGAAGTCGAATAAGCATCTTTGGGAACAGATTTCAGCGAAGATGAGAGAAAAGGGTTTTGATCGGTCACCGACTATGTGTACTGATAAATGGAGGAATCTTTTGAAAGAGTTTAAGAAAGCAAAGCATCATGATCGAGGTGGTGGAAGTGGTTCTGGTGGGAAAATGAGTTGTTACAAAGAGATTGATGAGATCTTAAGAGAGAGAAGTATTGATGATGCCAACATTTCTTTTGGGCCCGTTGAAGCTTCTGGAAGACCAACGCTCAATCTTGAGAGAAGTTTGGATCATGACGGGCATCCTCTTGCCATTGCCGCAGCAGATGTAGCAGCAAGTGGAGTCCCTCCTTGGAATTGGAGAGAAACTCCCGGAAATGGCGGAGAAAGTCAGTCTTGCTGTGGAAGGGTTATATCAGTCAAATGGGGTGACTATACAAGACGAATAGGTATTGATGGCACTCCGGAAGCCATCAAGGAGGCAATTAGGGCCGCTTTTAGGTTGAGAACTAAACGCGCTTTTTGGTTGGAGGATGAGGAACAGATTATCAGAAGTATTGACCGTGATATGCCTATTGGAAATTACACTCTTCACCTTGATGAAGGAATGGCCATCAAAGTATGCCTATATGATGAGTCTGACCATATCCCTGTGCATACTGAAGAGAAGATATTTTATACGGAGGATGATTACCGTGATTTTCTGGCACGTCGAGCTTGGACAGGTCTAAGAGAATTTGATGGTTATAGAAATATTGACAATATGGATGATCTTCGGCCCGGTGCTATATACCGAGGCGTGAGTTGA 1098 0.4554 MYLSSEKPRPIDFYKEEARDMMMEVVTNTDLQPPPPPPSQHHHHLQQQQPQMILTAESSGDDPEMEIKAPKKRAETWVQDETRSLIGLRREMDSLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHHDRGGGSGSGGKMSCYKEIDEILRERSIDDANISFGPVEASGRPTLNLERSLDHDGHPLAIAAADVAASGVPPWNWRETPGNGGESQSCCGRVISVKWGDYTRRIGIDGTPEAIKEAIRAAFRLRTKRAFWLEDEEQIIRSIDRDMPIGNYTLHLDEGMAIKVCLYDESDHIPVHTEEKIFYTEDDYRDFLARRAWTGLREFDGYRNIDNMDDLRPGAIYRGVS* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2834 365 MobiDBLite consensus disorder prediction 28 50 - -
Mtr3g2834 365 SMART sant 73 135 IPR001005 -
Mtr3g2834 365 Pfam Myb/SANT-like DNA-binding domain 76 163 IPR044822 -
Mtr3g2834 365 ProSiteProfiles Myb-like domain profile. 69 133 IPR001005 -
Mtr3g2834 365 CDD GT1 75 140 - -
Mtr3g2834 365 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 6 169 - -
Mtr3g2834 365 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 171 364 - -
Mtr3g2834 365 PANTHER - 171 364 - -
Mtr3g2834 365 PANTHER - 6 169 - -
Mtr3g2834 365 Gene3D - 77 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2834 Mtr-Chr3 42328526 42333673 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2834 21 364 Trihelix Transcription Factor Family AT3G25990 63.003 2.26e-168 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mtr3g2834 Myb_DNA-bind_4 3.8e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2834 - - ccaj:109807736 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2834 3 42328526 42333673 Mtr3g2834 3 42328526 42333673 ECH