Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2819 ATGATGGCGTTGGTGAGTCCTAGTACAGGGCTAAGGAAACAGGTTTTTCCAATTGACTACGAAACAGAGATGTCGCAGCGTCTTGTTGATGCAGCTCATCGTGGTGACACGGATTCTGCCATTGAATGTTTAGCGAATCCATTGGTGGATGTTAACTTCATTGGAACGGTCATGTTGAAGTCCAAAACAATGGAGATCGTGCTTCAAGATGAGTCACCTCATCGAGTAAATTCAGTGTATGAAGAGTTCAAAATCGAGGTCACTGCTCTGTTTTTGGCTGCACATTCTGGAAATTTGACGTTAATTCGTAAACTACTGAATGTGGGAGCTAATGTAAATGTGAGATTGTTCCGAGGCTATGCTACAACAGCAGCAGTGAGGGAAGGCCATTTGAAAATATTGGAGGTCCTTATCAATGGTGGGGCGTCACAACTTGCATGTGAAGAGGCTTTACTTGAAGCAAGCTATGTGGGACATGCAAGATTTGCTGAACTACTGATGCAATCCAACATGATCCGTCCTCATGTTGCAATACATGCCCTTGTCTCTGCTTGTTGCAGAGGATTCACTGAGGTTGTTGATGTACTCATCAAGCATGGAGTGGATGTTAATGCAATGGATAGGACTCTGCTTCAATCTTCAAAGCCATTTCTTCACGCTAATGTTGATTGCAATGCATTATTTGCTGCTGTGGTCAGCAGGCAGATAAATGTAGTTAGACTACTGTTGCAGGTTGGTGTAAGGCTAGATACCAAGGTCAAATTAGGAGCTTGGTCTTGGGAAAGAGATACAGGAGAAGAATTTCGTGTAGGTGTTGGACTAGCTGAGCCTTATCCAATCACATGGTGTGCTGTAGAGTATTTTGAATCAACTGGTACTATACTCAATATGCTTCTCTATCACCTCTCACCTAATAGTTTCCACATTGGAAGAACTCTCTTGCACCACACCATCATGTGCAACAATGAAAGAGCATTGAATATACTTTTAAGTAATGGTGTGGATACAGAACTAGTAGTGCAAACTACTGAAGAAACCAATGTACACCCTATTCACATGGCTGCGCGACTTGGGTCATGCAACATTCTTCGGTGTTTGATTAATGGTAAGTGTAACTTAGACTCACAAACAAAGTTTGGTGACACGGCATTGATGATTTGTACAAGGAATAAAAATGAGAAGTGTCTAAGAGTTTTAGTGTCATCAGGAGCTGACTTGGGGATAGTAAATTTGTCTGGTCATTATGCAACTTCAATATCAAGTTCTAATCAGTGGACTCAAGTTTATCAGAAAGCAATTCTGGATATAATTAGATCCGGAACAGGTGTTAAATCAAGTAATGCATCTAGATTTTCCGCTTTGTTATTTGTCACTCGCGCGAATGACATAGAGGCTTTGAAAAAGCTCATAGAATACCGGAATATAAATCTAGATGAACAAAATGGAAATGGACTTTCAGCTGTCATGATAGCTGCCGCAGAGGGTAACGTGGAAGCTTTCAAGGTACTTCTTCATGCTGGAGCTGATGTAATCAATCTTAAAAACAGATATGGTTTGACAGCTCTAAATCTCATAGACTTGAACCAAAATGGTGAAAATAAGGAAAATTTTCACAAGGTGATGTTTGAATATGCACTTAAAAAGGGATGTCTGAATATTAGTACTTTAACCGAGCCAAATCCTCTTCACCGTGCAGCTTGTTATGGAGACATAAGCATTGTTGAAAAATTATTAAAAGAGGGCTACTATGATGTGAATGGTTTTGATGGAAATGGATATACACCATTGATGTTAGCAGCAAGAGAAAGTAATGGAGAAATGTGTGAGATTTTGATATCTTATGGAGCAAAATGTGATGTTAAAAATGAGAGGAATGAAACAGCACTTTTACTTGCAAGAGAAAATAACAAAGGAAATGATGCAGAGCGTGTGATACTAGATGAGTTAGCTAGAAGAGTAGTGTTGCGTGGTGCATGTGTGAAAAAACATACAAAATGTGGTAAAGGGTTGCCACATAAGAAACAATTGGTAATGATTGGTGCTGCTGGAATTTTACGTTGGGGGAAATCAAATAAAAGAAATGTTGTTTGTAAAGAGGCTGAGGTTGGACCAAGTGAAAGATTTCGATGGAACCGTAGGAGGAAGTTTGATGTTGATGAGTTAGGAATGTTTTATGTTGTTACTGCAAAAAATAAGGAGGTGCATTTTGTTTGTGAAGGTGGGGTTGAAATGGCTGAGTTATGGGTAAGAGGGATTAGATTAGTAACAAGAGAAGCCATTTTTGGTTCTAGAGCTAATACTGGCTGA 2307 0.3962 MMALVSPSTGLRKQVFPIDYETEMSQRLVDAAHRGDTDSAIECLANPLVDVNFIGTVMLKSKTMEIVLQDESPHRVNSVYEEFKIEVTALFLAAHSGNLTLIRKLLNVGANVNVRLFRGYATTAAVREGHLKILEVLINGGASQLACEEALLEASYVGHARFAELLMQSNMIRPHVAIHALVSACCRGFTEVVDVLIKHGVDVNAMDRTLLQSSKPFLHANVDCNALFAAVVSRQINVVRLLLQVGVRLDTKVKLGAWSWERDTGEEFRVGVGLAEPYPITWCAVEYFESTGTILNMLLYHLSPNSFHIGRTLLHHTIMCNNERALNILLSNGVDTELVVQTTEETNVHPIHMAARLGSCNILRCLINGKCNLDSQTKFGDTALMICTRNKNEKCLRVLVSSGADLGIVNLSGHYATSISSSNQWTQVYQKAILDIIRSGTGVKSSNASRFSALLFVTRANDIEALKKLIEYRNINLDEQNGNGLSAVMIAAAEGNVEAFKVLLHAGADVINLKNRYGLTALNLIDLNQNGENKENFHKVMFEYALKKGCLNISTLTEPNPLHRAACYGDISIVEKLLKEGYYDVNGFDGNGYTPLMLAARESNGEMCEILISYGAKCDVKNERNETALLLARENNKGNDAERVILDELARRVVLRGACVKKHTKCGKGLPHKKQLVMIGAAGILRWGKSNKRNVVCKEAEVGPSERFRWNRRRKFDVDELGMFYVVTAKNKEVHFVCEGGVEMAELWVRGIRLVTREAIFGSRANTG* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2819 768 Gene3D - 537 675 IPR036770 -
Mtr3g2819 768 PANTHER ANKYRIN REPEAT-CONTAINING 9 762 - -
Mtr3g2819 768 ProSiteProfiles Ankyrin repeat region circular profile. 85 115 - -
Mtr3g2819 768 ProSiteProfiles Ankyrin repeat region circular profile. 591 623 - -
Mtr3g2819 768 SUPERFAMILY Ankyrin repeat 28 252 IPR036770 -
Mtr3g2819 768 Pfam Ankyrin repeats (3 copies) 541 622 IPR002110 GO:0005515
Mtr3g2819 768 Pfam Ankyrin repeats (3 copies) 315 408 IPR002110 GO:0005515
Mtr3g2819 768 Gene3D - 435 536 IPR036770 -
Mtr3g2819 768 Gene3D - 17 173 IPR036770 -
Mtr3g2819 768 ProSiteProfiles Ankyrin repeat profile. 379 411 IPR002110 GO:0005515
Mtr3g2819 768 ProSiteProfiles Ankyrin repeat profile. 180 208 IPR002110 GO:0005515
Mtr3g2819 768 ProSiteProfiles Ankyrin repeat profile. 591 623 IPR002110 GO:0005515
Mtr3g2819 768 ProSiteProfiles Ankyrin repeat region circular profile. 483 510 - -
Mtr3g2819 768 Gene3D - 174 260 IPR036770 -
Mtr3g2819 768 ProSiteProfiles Ankyrin repeat profile. 85 117 IPR002110 GO:0005515
Mtr3g2819 768 SMART ANK_2a 222 251 IPR002110 GO:0005515
Mtr3g2819 768 SMART ANK_2a 346 375 IPR002110 GO:0005515
Mtr3g2819 768 SMART ANK_2a 591 620 IPR002110 GO:0005515
Mtr3g2819 768 SMART ANK_2a 483 513 IPR002110 GO:0005515
Mtr3g2819 768 SMART ANK_2a 557 587 IPR002110 GO:0005515
Mtr3g2819 768 SMART ANK_2a 379 408 IPR002110 GO:0005515
Mtr3g2819 768 SMART ANK_2a 117 146 IPR002110 GO:0005515
Mtr3g2819 768 SMART ANK_2a 85 114 IPR002110 GO:0005515
Mtr3g2819 768 SMART ANK_2a 309 338 IPR002110 GO:0005515
Mtr3g2819 768 SMART ANK_2a 449 477 IPR002110 GO:0005515
Mtr3g2819 768 SMART ANK_2a 176 205 IPR002110 GO:0005515
Mtr3g2819 768 PANTHER ANKYRIN DOMAIN PROTEIN 9 762 - -
Mtr3g2819 768 ProSiteProfiles Ankyrin repeat profile. 483 515 IPR002110 GO:0005515
Mtr3g2819 768 SUPERFAMILY Ankyrin repeat 310 644 IPR036770 -
Mtr3g2819 768 Pfam Ankyrin repeats (many copies) 460 504 IPR002110 GO:0005515
Mtr3g2819 768 Gene3D - 301 434 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2819 Mtr-Chr3 42164501 42169447 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2819 353 538 Ion Channels AT2G25600 29.101 9.69e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2819 - - mtr:MTR_3g085630 1523.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2819 3 42164501 42169447 Mtr3g2819 3 42164501 42169447 ECH