Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2805 ATGATATTATATGATAAGAGAAATGAATTGGGAATTGTAATTGCTACGGTTATGGGTGAAGAAGAAGAGAAAACGCTGTCGTTTGAACCAGAGTTTCCGAAGAGTAGAGTGAAGAAGATAATCACTCTGGACAAAGACGTGAAGAGGGTGAGTTCAGAAGCTTTGTTCTTGGTGTCACGGTCTACGGAGCTTTTTTTACAGTTACTTGCTGAAAAGTCTGCGGAAGTTGCTATTGAGAAGAAGCGCAAGACGGTGAAGCTTGAACATATGAGAATCGCGGTGAAGAGAAACCGTCCAATAAGTGATTTTCTACTCGATTCGCTTCCGGTGCCGTCTGAAACTGTGAAATCTGATAAACCAGCGGCGGTTGTGGATCGGCCTAAATCCGTTTCGGTTGGTACTCGCCGCATCGATCAGATCTTCCGAAAGTCTGGAGGCGACGTTGAAGCTCAAGCGCAAGCGCAAGCACCAGCGCCGGAACCTGAACCTGAACCAGAACCAGAACCCATGGAGGAGGCATAG 522 0.4674 MILYDKRNELGIVIATVMGEEEEKTLSFEPEFPKSRVKKIITLDKDVKRVSSEALFLVSRSTELFLQLLAEKSAEVAIEKKRKTVKLEHMRIAVKRNRPISDFLLDSLPVPSETVKSDKPAAVVDRPKSVSVGTRRIDQIFRKSGGDVEAQAQAQAPAPEPEPEPEPEPMEEA* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2805 173 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 31 94 IPR003958 -
Mtr3g2805 173 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 20 144 - -
Mtr3g2805 173 Gene3D Histone, subunit A 6 109 IPR009072 GO:0046982
Mtr3g2805 173 PANTHER NUCLEAR FACTOR Y, SUBUNIT C13 20 144 - -
Mtr3g2805 173 MobiDBLite consensus disorder prediction 142 173 - -
Mtr3g2805 173 SUPERFAMILY Histone-fold 29 97 IPR009072 GO:0046982
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2805 20 150 CCAAT-HAP5 Transcription Factor Family AT5G43250 55.725 1.12e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mtr3g2805 CBFD_NFYB_HMF 3.2e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2805 - - vun:114164970 171.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2805 3 42059234 42060170 Mtr3g2805 3 42059234 42060170 ECH