Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2786 ATGCTACCTGGTTTGCAATACAATATCAATGATCTTTTTCAAGAAGCTAAGAAAAGATGGCTCAAGCCTATAGAAGTGCTTTACATTTTGCAGAATCATGATACCTGCAAGTTCACCGATTTTCCCCTTAACCAGCCTCGTGGTGGATCTGTGTATCTGTTTAATAAACGAGTCATGCGTTTCTTTCGAAAAGATGGTCATAATTGGCGGAAGAAAAAAGATGGAAGAACTGTTTCAGAAGCGCATGAACGGCTTAAGGTTGGAAATGTTGAAGCTCTAAACTGCTACTATGCACATGGAGAGGAGAACCGTAGTTTCCAGAGGCGAAGTTATTGGATGTTGAACCCGGAATATGAGCATGTTGTTCTCGTGCATTATAGAGAAACAAATGAGGGGACATCCAATTCTGGTCCTGTCACACAATCATCACCGTTTAGTCAGAGTCGTAGCTCATATACTACTCCAAACCCTGAGACAACATCCACAGTTGGTGATTCATGTGAACCTAATCAGAATTTCTCCAGTCCTGGGTTCTTAGAGGTCACCTCGGATATAGTCATCATGAATAATGGAACGGATCACGTAGAGAAAACAAACGCACAAGCTCTGCGCCAATTGGAGGAACAATTAAGTTTGAATGATGACAGCTTCACAGAAATTCCTCCCTTTTATAGTGAGCATGAAATTCCCGTTGCTTTCGCTGAACCAGATGATCATAAACAACCATATGATGGATATAATGGAACAAAAGATTGCAGTGGCAATCGTTATCGTGAATTACTTGACCATGATTTCCCTGGTGGGCATGAAAAAACCTTATCTTGGACAGAGATGCTGGAATCATCCAAGTCCTCATTTGTGAACAAGTTACCAGAACAACATGCATACAAGGAATTTGAAAATGAAACGCCTCTATCTTCTTTTGGAAGAGAAATGATTGCCAACCAGGAAACCAGTTACCGGATACACCCCAACAGCAATAATGATGAGAACTCATGGTTTTTACTTCCTCAAGACACTGGTGGAGTCCAATTTTCTCCATATTCTTCAATAGAAACTCAAGGAACTAATTCTGACTACTATGAAACATTGTTTGACCAAAGCCAAATTCAAGAACCTCGGGATGCATATTCAAGCTTGACTGTTGGCCAGAAACAGAAATTTACAATTACAGCTGTCTCCCCAGAATATTGTTATGCCAATGAGGCAACAAAGGTGATCATTGTTGGATCCTTTCTCTGCCTCCCCTCGGATTCTACCTGGGCTTGTATGTTTGGTGACGTTGAAGTTCCTACTGAAATAATTCAGGATGGCGTAATCTGTTGTGAGGCTCCGTCCCATCTTCTTGGAAAGGTTGCTCTGTGCATTACTTCAGGAAATAAGGAACCATGCAGTGAAATCAAAGAGTTTGAGTTTCGTAATAAGACCAATAGTTGCATTCACTGTAATGTTTTGGAAACAGAAGTTGCCCATAGTCCAGAAGAACTGTTATTACTTGTTCGATTTGCAGAAATGCTCCTCTCTGCTTCGACTATAAAGGATGATAGCTCAGAATCTGGAGGTCAATTTTCAACAGAACAGAAAGCAGATGATGATTCATGGAGCCATATTATAGATGCTCTCCTAGTTGGCAACGTAACTTCATCTGGTACTATTAATTGTCTTCTTCAAGAGCTGCTGAAGGATAAGCTGCGGCACTGGCTTTCTTGCAGATCCAATGAACGAGATGAAGATGCTGGTTGTTCTTTGTCCAAGAAAGAGCAAGGGATTATACACATAGTTTCTGGATTGGGTTTCGAGTGGGCCCTGAACCCCATTCTCAGTTGTGGCATGAATGTTAATTTCCGTGATATCAATGGATGGACTGCCCTTCATTGGGCTGCACGGTTTGGAAGGGAAAAAATGGTTACTTCACTTATAGCTGCTGGTGCATCTGCTGGAGCAGTGACGGATCCAAGTTCACAAGACCCAAATGGTAAAACTGCTGCATCTATTGCGGCCAGCAATGGCCACAAGGGACTGGCAGGTTATCTTGCAGAAGTAGATCTAACAAGTCATCTGTCGTCCCTCACATTGGAAAAGTGTGAAGTTCCTAAAGATTCTTCTGAGCTTGAAGCTGAGTTAACTGTCAGTAGTGTGTCTAAGAAAAATCTTGAAGCCAGTGATGATGAGGATTCACTAAAAAATACCTTGGGTGCTGTCAGAAATGCAGCTCAGGCAGCTGCACGTATACAGGCTGCTTTCCGTGCACATTCTTTCAGAAAACAGATGGAGAGAGAAGCTGCCTCCACCACTTGTCTAAATGGATATGTCACCGGTTTAGGTGGCATTGGTGGATATGTTAGGAGCTCACGTGATTACCATTCAGCTGCCTTATCAATTCAGAAGAAATATAGAGGCTGGAAAGTTCGCAAAGAGTACTTAGCTTTTCGCCAAAAAGTTGTAACGATACAGGCTCATGTGAGGGGTTACCAGACTCGGAGGCAATACAAGCTAATGATATGGGCAGTTGGAATCTTGGACAAGGTTGTGCTGAGGTGGCGGAGAAAACGGGTTGGTTTGCGAAGTTCTCCACAAGAAATAGATTCAAAAGAAGAAACTGATGATGAAGATTTTCTCAAGGTGTTCAGGCAAGAGAAAGTACATGCAGCAATTCAAAAGGCTTTGGCACGGGTGATTTCCATGGTCTCTTCTGTGCCTGCTCGGCATCAGTATAATCGCATGCTTGGGATGCGTCGTCGAGCCGAGGCTGAACATGGCAACACGAGTGATGAAATGGAAACACGGTTATCAACTTCTGTGGATGATGCTTGGAATATTGATGATGCTTGGAATATTGAAGATGATGATTTATATCAATTTCCTTGGGCGCTCTAG 2877 0.4251 MLPGLQYNINDLFQEAKKRWLKPIEVLYILQNHDTCKFTDFPLNQPRGGSVYLFNKRVMRFFRKDGHNWRKKKDGRTVSEAHERLKVGNVEALNCYYAHGEENRSFQRRSYWMLNPEYEHVVLVHYRETNEGTSNSGPVTQSSPFSQSRSSYTTPNPETTSTVGDSCEPNQNFSSPGFLEVTSDIVIMNNGTDHVEKTNAQALRQLEEQLSLNDDSFTEIPPFYSEHEIPVAFAEPDDHKQPYDGYNGTKDCSGNRYRELLDHDFPGGHEKTLSWTEMLESSKSSFVNKLPEQHAYKEFENETPLSSFGREMIANQETSYRIHPNSNNDENSWFLLPQDTGGVQFSPYSSIETQGTNSDYYETLFDQSQIQEPRDAYSSLTVGQKQKFTITAVSPEYCYANEATKVIIVGSFLCLPSDSTWACMFGDVEVPTEIIQDGVICCEAPSHLLGKVALCITSGNKEPCSEIKEFEFRNKTNSCIHCNVLETEVAHSPEELLLLVRFAEMLLSASTIKDDSSESGGQFSTEQKADDDSWSHIIDALLVGNVTSSGTINCLLQELLKDKLRHWLSCRSNERDEDAGCSLSKKEQGIIHIVSGLGFEWALNPILSCGMNVNFRDINGWTALHWAARFGREKMVTSLIAAGASAGAVTDPSSQDPNGKTAASIAASNGHKGLAGYLAEVDLTSHLSSLTLEKCEVPKDSSELEAELTVSSVSKKNLEASDDEDSLKNTLGAVRNAAQAAARIQAAFRAHSFRKQMEREAASTTCLNGYVTGLGGIGGYVRSSRDYHSAALSIQKKYRGWKVRKEYLAFRQKVVTIQAHVRGYQTRRQYKLMIWAVGILDKVVLRWRRKRVGLRSSPQEIDSKEETDDEDFLKVFRQEKVHAAIQKALARVISMVSSVPARHQYNRMLGMRRRAEAEHGNTSDEMETRLSTSVDDAWNIDDAWNIEDDDLYQFPWAL* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2786 958 SMART ANK_2a 619 648 IPR002110 GO:0005515
Mtr3g2786 958 SMART ANK_2a 658 687 IPR002110 GO:0005515
Mtr3g2786 958 Gene3D - 786 835 - -
Mtr3g2786 958 ProSiteProfiles IQ motif profile. 737 765 IPR000048 GO:0005515
Mtr3g2786 958 SMART iq_5 786 808 IPR000048 GO:0005515
Mtr3g2786 958 SMART iq_5 736 758 IPR000048 GO:0005515
Mtr3g2786 958 SMART iq_5 809 831 IPR000048 GO:0005515
Mtr3g2786 958 Pfam IQ calmodulin-binding motif 812 831 IPR000048 GO:0005515
Mtr3g2786 958 Pfam IQ calmodulin-binding motif 788 807 IPR000048 GO:0005515
Mtr3g2786 958 ProSiteProfiles CG-1 DNA-binding domain profile. 9 135 IPR005559 GO:0003677
Mtr3g2786 958 ProSiteProfiles Ankyrin repeat region circular profile. 619 645 - -
Mtr3g2786 958 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 954 - -
Mtr3g2786 958 CDD IPT 389 473 - -
Mtr3g2786 958 Pfam IPT/TIG domain 389 467 IPR002909 -
Mtr3g2786 958 SUPERFAMILY E set domains 389 473 IPR014756 -
Mtr3g2786 958 MobiDBLite consensus disorder prediction 130 170 - -
Mtr3g2786 958 Pfam Ankyrin repeats (3 copies) 602 680 IPR002110 GO:0005515
Mtr3g2786 958 Gene3D - 495 692 IPR036770 -
Mtr3g2786 958 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 737 838 IPR027417 -
Mtr3g2786 958 ProSiteProfiles IQ motif profile. 787 816 IPR000048 GO:0005515
Mtr3g2786 958 SUPERFAMILY Ankyrin repeat 588 680 IPR036770 -
Mtr3g2786 958 PANTHER CALMODULIN-BINDING PROTEIN 1 954 - -
Mtr3g2786 958 ProSiteProfiles Ankyrin repeat profile. 619 651 IPR002110 GO:0005515
Mtr3g2786 958 Pfam CG-1 domain 15 128 IPR005559 GO:0003677
Mtr3g2786 958 ProSiteProfiles IQ motif profile. 811 834 IPR000048 GO:0005515
Mtr3g2786 958 Gene3D Immunoglobulins 383 478 IPR013783 -
Mtr3g2786 958 SMART CG_1_2 12 130 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2786 Mtr-Chr3 41872137 41882051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2786 5 955 CAMTA Transcription Factor Family AT1G67310 48.422 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Mtr3g2786 CG-1 4e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2786 K21596 - gmx:100791430 1232.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2786 3 41872137 41882051 Mtr3g2786 3 41872137 41882051 ECH
Mtr3g2786 3 41872137 41882051 Mtr8g2813 8 38821707 38830573 PCT