Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2781 ATGCTGAAATCTTTGACGAAAATCTTATCCCTTCAATCAAACTACGGCATAAAGCAAAGGCGTGAACATGATGAAAATATAGTCGCTTTGCCTGTGCAGTTGGCAAATTGCAATGTTTGCGTAGAGGAAAACAGACACTGCAATTGTGATCACACCATTGCTGAGGATAGAAATAACACTACTACTGCAGAAGGCGTCAATGTCGACGTGGAACATGATTCTAATGCTGATAGTTCTTTTGCTCATGCTGTTATCAACATGGTGGGAATGCTCATAGGTTTGGGGCAACTATCAACTCCATATGCTGTTGAAAAAGGAGGGTGGGCATCTACCTTATTGCTAGTAGGACTTGGGGTAATCTGTGCTTATACCTCTCATATACTTGGAAAATGTCTTGAAAAGAATCCAAAGTTAACAAGTTATGTGGATATTGGGAATCAAGCATTTGGATCAAAGGGAAGATTCTTAGTTGCAACATTCATCTACATGGAAATCTTCATGTCACTTGTTTCCTACACCATCTCATTACATGACAACTTGATCATAGTATTTTTGGGGACACATCTGAAGCTGAAATTGGCCATATTATCAACATCACAGCTCTTAACTTTGGTGGCAGTCTTGATTGCTCTGCCTAGTTTGTGGATCAGAGATTTGTCTTCTATATCTTTTCTTTCATCTCTTGGTATTCTTATGTCTCTTCTCATTTTTGTGTGTGTATCAGTCACTGCAATTTTTGGAGGTTTTCAAGCTAATAATAATCATAGTATACCTGTCTTCAAGTTACATAATATTCCATCAATATCTGGCCTTTATGTCTTTGGTTATGGAGGACATGTTGTTTTCCCTGATTTGTATAAATCCATGAAAGACCCCTCCAAGTTCACCAAAGTTTCAATTGTGAGCTTCACAATAGTTACAGCACTTTACACCTCAATGGGATTTATGGGTGCAAAAATGTTTGGAAATGATGTGAAATCTCAGATAACTCTCAACATGCCACCAAATCAAATTATAACAAAGATTGCTCTTTGGGCAACTGTGTTGACACCTATGACCAAATATGCACTTGAATTTTCACCTTTTTCAATTCAGCTGGAACAAACACTTCCAAATTCAATGAGTGGGAGGACAAAATTGGTAATCAGAGGATGTGTTGCTTCATTTTTGCTATTGACCATACTAACCCTTGCTCTGTCGGTGCCATATTTTGAGTATGTACTTAGCCTCACTGGTTCACTAGTTAGTGTAGCCATTTGTTTGATTTTTCCATGTGTTTTCTATATGAAGATTTTTTGGGGTAAAATAACAAGGCCTCTCTTAGTCCTAAACATTACTCTAGTCATATTTGGGGTTCTTCTTGGGGTGATTGGCACCATTTCCTCTACAGAGTTAATATTGAGAAAAATTATGTCACATCATTCAACTTGA 1431 0.376 MLKSLTKILSLQSNYGIKQRREHDENIVALPVQLANCNVCVEENRHCNCDHTIAEDRNNTTTAEGVNVDVEHDSNADSSFAHAVINMVGMLIGLGQLSTPYAVEKGGWASTLLLVGLGVICAYTSHILGKCLEKNPKLTSYVDIGNQAFGSKGRFLVATFIYMEIFMSLVSYTISLHDNLIIVFLGTHLKLKLAILSTSQLLTLVAVLIALPSLWIRDLSSISFLSSLGILMSLLIFVCVSVTAIFGGFQANNNHSIPVFKLHNIPSISGLYVFGYGGHVVFPDLYKSMKDPSKFTKVSIVSFTIVTALYTSMGFMGAKMFGNDVKSQITLNMPPNQIITKIALWATVLTPMTKYALEFSPFSIQLEQTLPNSMSGRTKLVIRGCVASFLLLTILTLALSVPYFEYVLSLTGSLVSVAICLIFPCVFYMKIFWGKITRPLLVLNITLVIFGVLLGVIGTISSTELILRKIMSHHST* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2781 476 Pfam Transmembrane amino acid transporter protein 78 460 IPR013057 -
Mtr3g2781 476 PANTHER AMINO ACID TRANSPORTER AVT1H 62 472 - -
Mtr3g2781 476 PANTHER OS05G0424000 PROTEIN-RELATED 62 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2781 Mtr-Chr3 41831049 41833457 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2781 37 474 Amino Acid or Auxin Permease AAAP Family AT5G16740 58.050 2.43e-168 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2781 - - lang:109342470 649.818