Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2769 ATGAACAGTGAAAGATTTTTTCAATGGATGAATGGTTACAACACAACCCCTAAGATAAACACTCATTCATCATTTAATTCGGATTCATCATCATCAGCTGGGATCAATAATTTTGGTAGTCATGCTCCGGGAATCAAAAAAGCGATGCAGATTCTTGAAGCTCAGTTTGGACATCTGCAAACATCAACATCATCAATTAATATTAATGATGACATCATCAACAACAACAACAAGACCGCCAACAACAACAACAACAAGATGATGAAAATGAATACTTCTACTACTTCTTCTCATCTTGATCTTCATGTAGGCTTATCATCACAACTACAAGAACTGCCTTCTCAAACTATCAATTTATTTGTTACTGATGTTAGGGATATTAACAAGAATGATAAAAGGAAGAAGAAGAAGAGCAATGAAAATATCGATGATGGTAAAATTCACAGCCTACCACACGAGAAACATGGACCATACCCATGTTCCCAATGCAACAAAATATTTGAAACATCACAAAAATTTGCTAATCATGTTTCATCAAGTCACTACAAGTTCGAAAGTGAAGAAGACAGAAAAAAGAGATACAATTCTAGGATTCGAAAGAGACCGCGTCTTCAGATTCAAAAGCTCAATGATGGAAGAACTACTTTTGTTCCTGTTGTTGCTTGTGCTGATAAGTCACATGCTTCAATCAATAATGATGATCATAATATGATTTCTCTCACCCCTCTTCCAAGTGGGATAAAAGTCAAGTCGGAGCCATCAGATAACTAA 771 0.3554 MNSERFFQWMNGYNTTPKINTHSSFNSDSSSSAGINNFGSHAPGIKKAMQILEAQFGHLQTSTSSININDDIINNNNKTANNNNNKMMKMNTSTTSSHLDLHVGLSSQLQELPSQTINLFVTDVRDINKNDKRKKKKSNENIDDGKIHSLPHEKHGPYPCSQCNKIFETSQKFANHVSSSHYKFESEEDRKKRYNSRIRKRPRLQIQKLNDGRTTFVPVVACADKSHASINNDDHNMISLTPLPSGIKVKSEPSDN* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2769 256 ProSitePatterns Zinc finger C2H2 type domain signature. 160 181 IPR013087 -
Mtr3g2769 256 SUPERFAMILY beta-beta-alpha zinc fingers 154 183 IPR036236 -
Mtr3g2769 256 MobiDBLite consensus disorder prediction 130 155 - -
Mtr3g2769 256 MobiDBLite consensus disorder prediction 130 153 - -
Mtr3g2769 256 ProSiteProfiles Zinc finger C2H2 type domain profile. 158 186 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2769 Mtr-Chr3 41691479 41692582 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2769 144 226 C2H2 Transcription Factor Family AT5G22990 50.602 2.87e-21 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mtr3g2769 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2769 - - mtr:MTR_3g084720 306.219