Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2762 ATGGCTCCCCCAAAATCAAAACTCAAAACCCTAATTTCTCTCTCTAAACTCTTCTTTACTTTCTCTTTCCTCCTTCACACCGCCATTGCCGACGATGGCGCGTTCATGTCAAAACTCGCGAAATCTCTCACTCCACCTCCGTCAGGGTGGTCGGGAAACTCGTTTTGCAGCTGGAACGGTGTGAAATGCGACGGTTCAGACCGTGTTACGTCGTTAAACTTGGCTTCGAAATCACTCACCGGAACATTACCTTCCGATCTGAACTCACTCTCTCAGCTCACTACACTTTCTCTTCAATCCAACTCACTCACCGGCGCGTTGCCTTCTCTCGCGAACCTCACCATGCTTCAAACGGTTTTCCTTGGAGGAAATAACTTCACTTCAATCCCAGATGGTTGTTTCGTTGGACTCACCAGTTTGCAGAAGCTCTCCCTGACGGAAAACATCAATCTCAAACCGTGGAAGCTTCCCATGGATTTCACTCAGTCTTCGAATCTCGTTGAGCTTGACCTAGGCCAAACAAATCTCATTGGTTCATTGCCGGATATTTTCGTTCCGTTGGTTAGTTTGCAGAATCTGAGGTTATCTTACAATAATCTCACTGGAGATCTACCTAACTCGTTTTCAGGATCTGGGATTGTGAATTTGTGGCTCAATAATCAGAATGACGGGTCTGGTTTTACCGGTTCAATTGATTTGCTTGCGTCTATGTCGCATTTGGCTCAAGTTTGGTTTCAGAAGAATAAGTTTACTGGTTCAATTCCTGATTTGTCTAATTGTACTAACTTGTTTGATCTTCAGCTTCGTGATAATCAGTTAACAGGTGTTGTTCCATCCTCTTTGATGAGTTTATCGAGTTTGGCGAATGTTTCTTTGGATAATAATAAGTTGCAGGGTCCTTTGCCTTCTTTTGGGAAAAGTGTAAAGGTTACTCTTGATGAAGGGATCAATAGTTTTTGTAAGACTACTCCTGGACCTTGTGATCCGAGGGTTAGTACTTTGCTTGATATTGCTGCTGGTTTTGGGTATCCACTTCCATTGGCGAATTCTTGGAAAGGGAATGATCCTTGTGATGATTGGACCTTTGTTGTGTGTTCCGGAGGGAAGATTATTACGGTTAATTTAGCGAAGCAGAATTTGAATGGAACTATTTCGTCTGCATTTGGGAATTTGACTGATTTGAGGAATTTGTATCTGAATGGTAATAATTTGACAGGTTCAATACCGGGGAGCTTGACGGGTTTGACTCAGCTTGAGGTTTTGGACGTGTCTAATAACAATCTATCTGGAGAGATTCCTAAATTTTCGGGTAAAGTGAGGTTCAATTCGGCTGGTAATGGTTTGCTTGGAAAGTCTGAAGGTGATGGAGGAAGTGGAACTGCTCCACCAACGGATCCTAGTGGTGGGCCGAGTGGAAGTCCTCCGGAAAAGGGTGGTTCTTCGTTGTCACCTGGTTGGATTGCAGGTATAGCTGTTATTGCTGTGTTTTTTGTTGCAGTGGTGTTGTTTGTGTTTTGTAAGTGTTACGCTAAAAACAGGAGGCATACGAAATTTGGAAGGGTTAATAATCCTGAAAATGGTAAAAATGATGTTAAAATTGATGTCATGAGTAATGTTTCCAATTCTAATGGATATGGTGGAGTTCCGAGTGAGTTACAGAGTCAGGGAAGTGAGCGTAGTGACAACCTTCAGGTTTTTGAGGGTGGAAATGTTACTATTTCAATCCAAGTTCTTAGACAAGTAACCGGTAATTTCAATGAAGATAACATTTTGGGTAGGGGAGGATTTGGAGTTGTTTATAAAGGGGAACTGCATGATGGAACTAAGATTGCTGTCAAGAGGATGGAATCTGTTGCAGTTGGAACTAAGGGATTGAACGAGTTCCAAGCAGAGATTGCAGTTCTGACTAAAGTTAGGCATAGGCATTTGGTTGCTCTTTTAGGATACTGCATAAATGGCAATGAAAGGCTTTTGGTGTATGAGTATATGCCTCAAGGAACATTAACGCAACATCTGTTTGATTGGGGTGAAAATGGATGCGCTCCTTTGACTTGGTTACAGAGGGTAGCAATAGCTTTGGATGTAGCACGAGGAGTAGAATACTTGCACAGCTTAGCTCAGCAAAGCTTCATTCACAGGGACTTAAAACCCTCCAACATACTGTTGGGTGATGACATGAGAGCAAAGGTTGCAGATTTTGGGTTGGTTAAAAATGCACCGGATGGCAAATATTCCGTCGAGACAAGGTTGGCTGGAACATTTGGATATTTGGCACCTGAGTATGCAGCCACTGGAAGAGTGACAACCAAAGTAGATGTTTACGCATTTGGAGTAGTTCTGATGGAACTGATTACTGGTAGAAGGGCATTAGATGATACTATGCCTGACGAAAGATCTCATTTGGTTTCATGGTTCCGTAGGGTACTAGTCAACAAGGAGAATATCCCTAAAGCAATTGATCAAACGCTCAACCCCGATGAAGAAACCATGGAGAGCATATATAAAATTGCTGAGCTGGCAGGCCACTGCACTGCTCGCGAACCATACCAGAGACCAGATATGGGTCATGCAGTGAATGTCCTGGTTCCTTTAGTAGAGCAATGGAAGCCTAGCAACCACGAAGAAGAAGACGGTTATGGTATTGACCTTCACATGAGCCTTCCTCAAGCTCTACAAAGATGGCAAGCCAATGAAGGCACTTCCACAATGTTTAATGACATGTCTTTCTCACAAACCCAATCAAGTATTCCATCAAAACCTTCAGGATTTGCAGACTCATTCGATTCAATGGATTGCCGGTAA 2802 0.4297 MAPPKSKLKTLISLSKLFFTFSFLLHTAIADDGAFMSKLAKSLTPPPSGWSGNSFCSWNGVKCDGSDRVTSLNLASKSLTGTLPSDLNSLSQLTTLSLQSNSLTGALPSLANLTMLQTVFLGGNNFTSIPDGCFVGLTSLQKLSLTENINLKPWKLPMDFTQSSNLVELDLGQTNLIGSLPDIFVPLVSLQNLRLSYNNLTGDLPNSFSGSGIVNLWLNNQNDGSGFTGSIDLLASMSHLAQVWFQKNKFTGSIPDLSNCTNLFDLQLRDNQLTGVVPSSLMSLSSLANVSLDNNKLQGPLPSFGKSVKVTLDEGINSFCKTTPGPCDPRVSTLLDIAAGFGYPLPLANSWKGNDPCDDWTFVVCSGGKIITVNLAKQNLNGTISSAFGNLTDLRNLYLNGNNLTGSIPGSLTGLTQLEVLDVSNNNLSGEIPKFSGKVRFNSAGNGLLGKSEGDGGSGTAPPTDPSGGPSGSPPEKGGSSLSPGWIAGIAVIAVFFVAVVLFVFCKCYAKNRRHTKFGRVNNPENGKNDVKIDVMSNVSNSNGYGGVPSELQSQGSERSDNLQVFEGGNVTISIQVLRQVTGNFNEDNILGRGGFGVVYKGELHDGTKIAVKRMESVAVGTKGLNEFQAEIAVLTKVRHRHLVALLGYCINGNERLLVYEYMPQGTLTQHLFDWGENGCAPLTWLQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRRALDDTMPDERSHLVSWFRRVLVNKENIPKAIDQTLNPDEETMESIYKIAELAGHCTAREPYQRPDMGHAVNVLVPLVEQWKPSNHEEEDGYGIDLHMSLPQALQRWQANEGTSTMFNDMSFSQTQSSIPSKPSGFADSFDSMDCR* 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2762 933 Gene3D Transferase(Phosphotransferase) domain 1 663 885 - -
Mtr3g2762 933 ProSiteProfiles Protein kinase domain profile. 585 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2762 933 PANTHER RECEPTOR PROTEIN KINASE TMK1-RELATED 19 933 - -
Mtr3g2762 933 Pfam Leucine rich repeat N-terminal domain 31 64 IPR013210 -
Mtr3g2762 933 Pfam Leucine rich repeat N-terminal domain 332 366 IPR013210 -
Mtr3g2762 933 SMART LRR_typ_2 391 414 IPR003591 -
Mtr3g2762 933 SMART LRR_typ_2 415 439 IPR003591 -
Mtr3g2762 933 SMART LRR_typ_2 113 136 IPR003591 -
Mtr3g2762 933 SMART LRR_typ_2 187 210 IPR003591 -
Mtr3g2762 933 SMART LRR_typ_2 90 112 IPR003591 -
Mtr3g2762 933 SMART serkin_6 585 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2762 933 Gene3D Ribonuclease Inhibitor 329 452 IPR032675 -
Mtr3g2762 933 MobiDBLite consensus disorder prediction 450 480 - -
Mtr3g2762 933 Pfam Leucine rich repeat 116 176 IPR001611 GO:0005515
Mtr3g2762 933 Pfam Leucine rich repeat 373 428 IPR001611 GO:0005515
Mtr3g2762 933 Gene3D Phosphorylase Kinase; domain 1 549 662 - -
Mtr3g2762 933 MobiDBLite consensus disorder prediction 910 933 - -
Mtr3g2762 933 ProSitePatterns Serine/Threonine protein kinases active-site signature. 710 722 IPR008271 GO:0004672|GO:0006468
Mtr3g2762 933 Gene3D Ribonuclease Inhibitor 33 327 IPR032675 -
Mtr3g2762 933 SUPERFAMILY Protein kinase-like (PK-like) 565 861 IPR011009 -
Mtr3g2762 933 Pfam Protein tyrosine and serine/threonine kinase 588 859 IPR001245 GO:0004672|GO:0006468
Mtr3g2762 933 PANTHER OSJNBA0070M12.3 PROTEIN 19 933 - -
Mtr3g2762 933 Pfam Leucine Rich Repeat 189 209 IPR001611 GO:0005515
Mtr3g2762 933 ProSitePatterns Protein kinases ATP-binding region signature. 591 613 IPR017441 GO:0005524
Mtr3g2762 933 CDD STKc_IRAK 591 864 - -
Mtr3g2762 933 SUPERFAMILY L domain-like 35 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2762 Mtr-Chr3 41605696 41609852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2762 64 861 Receptor kinase-like Gene Family AT5G07280 32.751 2.06e-95 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mtr3g2762 PK_Tyr_Ser-Thr 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2762 - - gmx:100781851 1437.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2762 3 41605696 41609852 Mtr3g2762 3 41605696 41609852 ECH