Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2748 ATGGGTTTTCGCTTACCTGGTATTAGACGATCATCATTTACTGCAGGTCAGTCATCCAGCAAACAAATGGAAGTCCCAAAAGGCTATTTAGCGGTGTATGTTGGAGAGGAAATGAAGAGGTTCTTGATTCCAGTAGCATTCTTGAATGAGCCTTTGTTTCAAGAATTGTTGAGCCAAGCTGAAGAGGAATTCGGTTACTGTCATCAAATGGGTGGTCTTACAATTCCGTGCAAGGAAGATGTGTTTTTACGTACAACTTCCCGCTTGAACGGCCTATAA 279 0.4229 MGFRLPGIRRSSFTAGQSSSKQMEVPKGYLAVYVGEEMKRFLIPVAFLNEPLFQELLSQAEEEFGYCHQMGGLTIPCKEDVFLRTTSRLNGL* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2748 92 Pfam Auxin responsive protein 11 88 IPR003676 GO:0009733
Mtr3g2748 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Mtr3g2748 92 MobiDBLite consensus disorder prediction 1 22 - -
Mtr3g2748 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2748 Mtr-Chr3 41489080 41489739 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2748 14 82 Calmodulin-binding Proteins AT3G43120 55.072 2.01e-20 78.2