Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2747 ATGGGTTTCCATTTACCTGCTATTAGACGAACTTCATTTACAAGTAGCCAAGCATCATCAAAAGCTGTGAATGTACCAAAGGGCTATCTTGCAGTATATGTTGGAGAGCAAATGAAGCGGTTTGTTATCCCCATGTCATACTTGAACCAAGCTTCCTTTCAAAACTTATTGAGTCAAGCAGAGGAAGAATTTGGATATGATCACCCAATGGGTGGCCTCACGATTCCTTGCACAGAAGACATTTTCATGGAAATTACTTCTCGCTTCAATGGGCTATAA 279 0.405 MGFHLPAIRRTSFTSSQASSKAVNVPKGYLAVYVGEQMKRFVIPMSYLNQASFQNLLSQAEEEFGYDHPMGGLTIPCTEDIFMEITSRFNGL* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2747 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 6 90 IPR003676 GO:0009733
Mtr3g2747 92 Pfam Auxin responsive protein 10 87 IPR003676 GO:0009733
Mtr3g2747 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 6 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2747 Mtr-Chr3 41478636 41479066 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2747 14 82 Calmodulin-binding Proteins AT3G43120 50.725 7.62e-21 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2747 K14488 - gmx:100817347 155.606