Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2715 ATGATGAATCTATCTTCATCAACAGATCAAGACAAATCAGAAACAACAAATTCAAATTCAAATTCAAATCCAAACAAAAAACAGAAGACAACAACAACTACACCTTGTTGCAGTAAAGTAGGGTTGAAGAGAGGACCGTGGACTGTAGAAGAAGATGAAGTTTTATCAGAATACATCAAAAAAGAAGGTGAAGGTCGTTGGAGAACTCTTCCCAAACGAGCTGGTCTTCTCCGTTGCGGCAAAAGCTGTCGTCTCCGTTGGATGAATTATCTTCGTCCATCCGTCAAACGCGGTCAGATCGCTCCTGATGAAGAAGATCTCATCCTCCGCCTCCACCGTCTTCTCGGCAACAGGTGGTCATTGATAGCTGGGAGAATTCCAGGAAGAACCGATAATGAGATTAAAAATTATTGGAACACACATCTCAGCAAGAAACTTATTAACCAAGGGATTGATCCCAGAACTCACAAGCCTCTTAATAACCCATCTTCTTCTTCTTCAATAATCCCAAATACTAATCACCAAACAAGTACTCCTTTTTTTGCACCATCTTCTTCTGATCATCATCATCCAATTACTATCACTAACAATGAACCTGATCCCTCTCAAACACAACAAGCTCAGGGTTGTGGTAACTTGGTTAATGATGTTTCTGCAATGGATAATCATCATGTGCTTACCAACAACAACAGAGGGGATTATGGAGACGACAATGGTAATAACAATTACGGCGGTGATGATGTGTTTACTTCATTTCTGGATTCATTGATCAACGACGATGCATTTGCTGCACACAGATCAGAGAATGATCCTTTGATCTTATCTGCTGCACCACCAGCTCTGTGGGAATCGCCGCCACTCATGATGACATCTACTCATAATTTCACCCAAAACCAAGACGGGAAAGCTTCTTAG 915 0.412 MMNLSSSTDQDKSETTNSNSNSNPNKKQKTTTTTPCCSKVGLKRGPWTVEEDEVLSEYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPSVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLINQGIDPRTHKPLNNPSSSSSIIPNTNHQTSTPFFAPSSSDHHHPITITNNEPDPSQTQQAQGCGNLVNDVSAMDNHHVLTNNNRGDYGDDNGNNNYGGDDVFTSFLDSLINDDAFAAHRSENDPLILSAAPPALWESPPLMMTSTHNFTQNQDGKAS* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2715 304 PANTHER TRANSCRIPTION REPRESSOR MYB5-LIKE 25 274 - -
Mtr3g2715 304 MobiDBLite consensus disorder prediction 153 209 - -
Mtr3g2715 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 91 IPR017930 -
Mtr3g2715 304 MobiDBLite consensus disorder prediction 1 37 - -
Mtr3g2715 304 Gene3D - 44 96 - -
Mtr3g2715 304 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 25 274 - -
Mtr3g2715 304 MobiDBLite consensus disorder prediction 154 209 - -
Mtr3g2715 304 Gene3D - 101 168 - -
Mtr3g2715 304 CDD SANT 102 142 IPR001005 -
Mtr3g2715 304 CDD SANT 46 91 IPR001005 -
Mtr3g2715 304 ProSiteProfiles Myb-like domain profile. 39 91 IPR001005 -
Mtr3g2715 304 SMART sant 96 144 IPR001005 -
Mtr3g2715 304 SMART sant 43 93 IPR001005 -
Mtr3g2715 304 Pfam Myb-like DNA-binding domain 44 91 IPR001005 -
Mtr3g2715 304 Pfam Myb-like DNA-binding domain 101 142 IPR001005 -
Mtr3g2715 304 SUPERFAMILY Homeodomain-like 41 138 IPR009057 -
Mtr3g2715 304 ProSiteProfiles Myb-like domain profile. 92 142 IPR001005 -
Mtr3g2715 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 146 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2715 Mtr-Chr3 41162103 41163504 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2715 25 259 MYB Transcription Factor Family AT3G13540 57.143 1.47e-87 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr3g2715 Myb_DNA-binding 5.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2715 K09422 - pvy:116139454 290.426