Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2685 ATGAGTTTCATCGACGACGGCGGCATCGACTTAGACCCTTCTGATTTCGGCACATCAGTCCCATTAAAAAAAGTCCCAAACGGCGACGTTTTCCAAGCCTCCCGCGCCGGCGACCTCGACCGTCTCCGTTACCTTCTTGAATGCGGCGTTAACGTCAACGCACGTGACCAATGGGACTCCACCGCTCTCTACTACGCTTGTCTCGCCGGTCACCTCGATGCCGCTCGTATGCTTCTTGAAAACGGCGCTATCTGCTCCGAACACACGTTTGACGGTGACCGGTGTCATTACTCTGCTCTTAATTTGAAGGTTAGGAAGCTTCTTAAAGCTTTTGAAGCTCGTCCTCCTCCGTTGAATCCGTTGCAGAGTTCTCTTCGTGATACTTTCTTTGCTTGTCCCGCCAATTCGCATTCCGGTGGCTTTAACTTGTCTGGTATTTCATCCACTCCAGGGTTCAGTTCCAACTACTTTCCCCCAGATGTGGTTTTTACTGTACAAGGAAGACCTATTGAAGCTCACAGGGTCATATTAAGTGCAAGGTCGCCATTTTTCAAGAAAAAGTTTGAGACTGATTGGAAAGAGCGCGGTGAAGTGAGATTTGCACGGGAAAAGTTGTCATATCCTGCACTTTGTAGCCTTATACATTTCTTTTATTCAGACAGATTAGAGATTGCTGTGGATGATATGGAGAATCTTGTGAGAATTTGCAAAGTATGCAAATGTGAATCTCTGCAGAAAATTCTTGAGAAAGAAGTAATTCATCAAAAATATGCAGACTATAAAGCTTTGACAGATATAGACAATTCTCAGAAGCGGTTTATTTTACAGGGCATATCCCTTCCTGAAGAAGACAGGCTTCCTGCAGCCTTGCGTAGAATCCTTCTGACTGCCCTTTCAAATTCCACTTATGAGAATGGTCAAGATAATGGAATCGATGAATTGGTATCTAGGATGGATGCCATGCATATGGCTAAACCTCTAAATGATCTTGCTGATGTTTGCGTTAGAGTTGATAAAAAGAATTTCCGCTGCCATAAAGTTATTCTAGCATCGAGGTCAGAATATTTCAAAGCAAGACTCTCACGTATGAAGGATTTCCATGAAGGGAAAGATGAATTATATATTGACTTCCTTCCTTGTCTTGAAGAACACGACATGAGTGTGGAAGCATTTGAGAAAATGATTGAATATATGTACACCGATCGTTTGCAGGAAATAAATCCAGATCAGGCTGAGGAAATGTTTGATATTGCTTCTAGATACTTGATGTTTCCTCTTAAGCGTGCGGTGGCTGATGTCTTGTTGCCACATCTGGAAACGGCGTCACCTGAGGAGCTTTGCCATTGGTTAATGCTAGCAGACATGTATGGTGTTTTGAAGATTCGGGAATTCTGTCTAGATACCATTGCCTGTAATTTTGAATTATTTGCCGATACAAAAGAATTCCGGGCAATGCTGTTGACTTTACCTCCACCATCTGGAGACTCATCTCTTCGTACAACTGTCCCGAGCATGCCTGGGTCTTCCCTAAATAATGATCAAGGAAATCTTCTTGATGATTTACGTGATAAATGGCTTGAAATTGAAGCCGCCGAGCTTGATGAGAGAGATGAGAGTGCTTTACAATTTGACAAGCGCCTAGAGATGCTTATGGTTGTTGCAGAGCATGAAAAGTCATCAGGTGATGCTGAATCAGAAGTTGTTAATGATGTCACACCTTTGACTTTCTCTCCAATCACCGCTGTAATTTCAGGCGAACAAAAAGAACCCTAG 1773 0.432 MSFIDDGGIDLDPSDFGTSVPLKKVPNGDVFQASRAGDLDRLRYLLECGVNVNARDQWDSTALYYACLAGHLDAARMLLENGAICSEHTFDGDRCHYSALNLKVRKLLKAFEARPPPLNPLQSSLRDTFFACPANSHSGGFNLSGISSTPGFSSNYFPPDVVFTVQGRPIEAHRVILSARSPFFKKKFETDWKERGEVRFAREKLSYPALCSLIHFFYSDRLEIAVDDMENLVRICKVCKCESLQKILEKEVIHQKYADYKALTDIDNSQKRFILQGISLPEEDRLPAALRRILLTALSNSTYENGQDNGIDELVSRMDAMHMAKPLNDLADVCVRVDKKNFRCHKVILASRSEYFKARLSRMKDFHEGKDELYIDFLPCLEEHDMSVEAFEKMIEYMYTDRLQEINPDQAEEMFDIASRYLMFPLKRAVADVLLPHLETASPEELCHWLMLADMYGVLKIREFCLDTIACNFELFADTKEFRAMLLTLPPPSGDSSLRTTVPSMPGSSLNNDQGNLLDDLRDKWLEIEAAELDERDESALQFDKRLEMLMVVAEHEKSSGDAESEVVNDVTPLTFSPITAVISGEQKEP* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2685 590 Gene3D - 30 115 IPR036770 -
Mtr3g2685 590 ProSiteProfiles BTB domain profile. 331 407 IPR000210 GO:0005515
Mtr3g2685 590 ProSiteProfiles Ankyrin repeat profile. 58 83 IPR002110 GO:0005515
Mtr3g2685 590 ProSiteProfiles Ankyrin repeat region circular profile. 58 83 - -
Mtr3g2685 590 CDD BTB_POZ_ZBTB_KLHL-like 330 421 - -
Mtr3g2685 590 SUPERFAMILY POZ domain 154 251 IPR011333 -
Mtr3g2685 590 Pfam BTB/POZ domain 158 255 IPR000210 GO:0005515
Mtr3g2685 590 Pfam BTB/POZ domain 329 434 IPR000210 GO:0005515
Mtr3g2685 590 CDD BACK 442 485 - -
Mtr3g2685 590 PANTHER ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1 7 554 IPR044515 -
Mtr3g2685 590 SMART BTB_4 331 438 IPR000210 GO:0005515
Mtr3g2685 590 SMART BTB_4 159 256 IPR000210 GO:0005515
Mtr3g2685 590 Gene3D Potassium Channel Kv1.1; Chain A 151 274 IPR011333 -
Mtr3g2685 590 Gene3D Potassium Channel Kv1.1; Chain A 312 470 IPR011333 -
Mtr3g2685 590 SUPERFAMILY Ankyrin repeat 32 110 IPR036770 -
Mtr3g2685 590 SMART ANK_2a 27 54 IPR002110 GO:0005515
Mtr3g2685 590 SMART ANK_2a 58 87 IPR002110 GO:0005515
Mtr3g2685 590 ProSiteProfiles BTB domain profile. 159 226 IPR000210 GO:0005515
Mtr3g2685 590 Pfam Ankyrin repeats (many copies) 45 92 IPR002110 GO:0005515
Mtr3g2685 590 SUPERFAMILY POZ domain 327 437 IPR011333 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mtr3g2685 BTB 5e-17 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2685 K10520 - gmx:100812009 902.508