LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr3g2642	ATGGCTGGTAGTATACTTTGGTACACCCACGTAACAATGAAGAACATGAATATCTACCAATATCCCATTGAAAAACTGAGGGTGCAGCCGGTAGGCCTAATTGTCGCTTTTGCTGTGATGGCCACACTTGCTGCAGAGTGCACATGTGACGAAGAAGATGAAGAAAGGGACAGATCAAAAGCTCTACGCTACAAAATAGCGGCTTTAGTGTCAATATTAGTTGCAAGTGCAATTGGTGTTTGTCTCCCACTTCTTGGGAAAGTGATACCGGCATTAAGCCCTGAAAAAGATATATTTTTTATCATCAAAGCATTTGCTGCCGGTGTGATACTGTCCACCGGTTTCATTCATGTGCTTCCTGATGCTTTTGAGAATCTTACTTCTCCATGTTTAAACGAACATCCTTGGGGTGATTTTCCCTTCACTGGTTTTGTAGCTATGTGCACCGCTATGGGGACTCTTATGGTTGATACTTATGCAACCGCTTATTTTCAGAACCATTATTCTAAAAGGGCACCGGCACAGGTTGAAAGTCAGACAACCCCAGACGTGGAGAATGAAGAACATACACATGTTCATGCTCACGCATCACATAGTCATGCACATGGTCATATTTCTTTCGATCAGTCATCAGAACTTCTTCGTCATAGGGTCATATCACAGGTGTTGGAGTTGGGAATTATTGTTCACTCTGTTATCATAGGAATTTCTTTAGGTGCTTCAGAGAGTCCTAAAACCATAAGACCATTAGTGGCTGCGTTGACTTTTCATCAGTTCTTTGAAGGCATGGGACTTGGAAGTTGTATAACTCAGGCAAATTTCAAGAGTCTATCAATTACTATTATGGGATTGTTCTTTGCTTTGACAACTCCAGTAGGAATTGGAATTGGCTTAGGGATCAGCAATGTTTATGATGAGAACAGTCCAACTGCTCTTATTTTTGAAGGAATCTTCAATGCAGCTTCAGCTGGGATCTTAATCTATATGGCACTTGTAGATCTTCTTGCTGCTGATTTTATGAATCCAAGGATGCAAAAGAATGGTAGGCTTCAATTAGGATCCAATATATCTCTTCTACTAGGAGCTGGTTGTATGTCTCTTATAGCCAAATGGGCTTAG	1119	0.4111	MAGSILWYTHVTMKNMNIYQYPIEKLRVQPVGLIVAFAVMATLAAECTCDEEDEERDRSKALRYKIAALVSILVASAIGVCLPLLGKVIPALSPEKDIFFIIKAFAAGVILSTGFIHVLPDAFENLTSPCLNEHPWGDFPFTGFVAMCTAMGTLMVDTYATAYFQNHYSKRAPAQVESQTTPDVENEEHTHVHAHASHSHAHGHISFDQSSELLRHRVISQVLELGIIVHSVIIGISLGASESPKTIRPLVAALTFHQFFEGMGLGSCITQANFKSLSITIMGLFFALTTPVGIGIGLGISNVYDENSPTALIFEGIFNAASAGILIYMALVDLLAADFMNPRMQKNGRLQLGSNISLLLGAGCMSLIAKWA*	373

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr3g2642	372	PANTHER	ZINC/IRON TRANSPORTER	37	372	-	-
	Mtr3g2642	372	TIGRFAM	zip: ZIP zinc/iron transport family	47	372	IPR004698	GO:0005385\|GO:0016021\|GO:0071577
	Mtr3g2642	372	PANTHER	ZINC TRANSPORTER 1	37	372	-	-
	Mtr3g2642	372	Pfam	ZIP Zinc transporter	64	369	IPR003689	GO:0016020\|GO:0030001\|GO:0046873\|GO:0055085

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr3g2642	Mtr-Chr3	40470835	40477754	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr3g2642	40	372	Inorganic Solute Cotransporters	AT3G12750	56.380	1.75e-133	384

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr3g2642	K14709		-	gmx:100789557	516.153

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