Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2636 ATGGAGAAGGAAGGTGTTGAACTTCAAACTGATGCAGTTTCAATGATGTCAGATTCTTCTCTTCTTCATCATCAGTCCAGAAGGCCTAGTCTTTCATCTCTACAAATACCAACAAGGACACTAGAAAGTGCATTATCATCTTCTACTAAGACAGATGGTCCTACATTATCAAGTCCAGGTTCCACTAGAGGACTGCCACCAAGGCCACATTCTACCAAAGTCAAGTCTTCTATGAAAAATTTACTTTCTGATAGGAGCTTTAGGACAAAAACTTGTTCAGAAGATTCTGAAAAGAGAGTTTTGATTGTTTCTGATACTTTATCATCAGATAACGGTCCTCTGGATAATAAGCCTTCAACTTCAAGGTCTCATTCACTTAATAAGATTCTGTTCCCTTCATCGAGTAAAGCGGCACATTCGTTACCGGTTACTCCAATTGCTAATTCAGGTGCAGAGAATGTACATGGAAGACATGTAGAGGGTGGTTCTGATTCAAATAAATCGAAAGTGAATAAGCATATGACTCGATCATTTTCAGTTCCGGTTAATGTCAAAGCCACTAATTTAAGGCCTGCAACAGATACTAGGCGTCTGGTTCGTGTAATTTCAGCAAGACCACAGCCAGCAACTACTGATGGCATTTCAACCCGCAGTGATTCAATGCAAGAGATCGTCATTGAAGATGCTTCTGAGGATATTCCAGAAGAAGAAGCAGTTTGCAGGATTTGTTTGGTGGAGCTTGCGGAAGGGGGGGATACTCTTAGGATGGACTGCAGTTGTAAAGGTGAGCTTGCACTTGCTCACCAAGACTGTGCAGTAAAGTGGTTTAGTATCAAAGGAAATAAGACATGTGATGTCTGCAAGCAGGATGTCCGGAATCTTCCAGTAACACTCTTGAAAATTTCTAGTCCTCCGACTGTTGTTCGGCATACATTGAATGCATCACAACAGAGAGCAGTAACTAATTACAGGATCTGGCAGGATGTACCTGTACTTGTCTTGGTCAGCATGCTTGCATACTTTTGCTTTCTGGAGGAACTACTGGTTTCAGATTTGGGCCCACGTGCTCTCGCCATTTCATTGCCTTTCTCCTGCATTTTAGGTCTCCTTTCATCCATTATTGCTTCAACCATGGTAAGCAGGAGTTACATATGGGCTTATGCTTGCTTCCAGTTTGCATTTGTCATCCTGTTTGCGCATATATTCTATTCCATACTTAATGTTAGTGCGATTTTCTCGGTTCTTCTTGCAACATTCACTGGATTTGGGATAGCAATCAGCATGAATTCTCTCCTAATGGAATATATCAGATGGGAAACAAATAGGCAGATTCGATCTTCTAATCAAAATATTATTTCGAGTCAGCAGCAGCAAGAAACTCAGAGACAACCACATCAACTGCAAAGGATGCAGCAAGAGCAGCACCAATGA 1431 0.4144 MEKEGVELQTDAVSMMSDSSLLHHQSRRPSLSSLQIPTRTLESALSSSTKTDGPTLSSPGSTRGLPPRPHSTKVKSSMKNLLSDRSFRTKTCSEDSEKRVLIVSDTLSSDNGPLDNKPSTSRSHSLNKILFPSSSKAAHSLPVTPIANSGAENVHGRHVEGGSDSNKSKVNKHMTRSFSVPVNVKATNLRPATDTRRLVRVISARPQPATTDGISTRSDSMQEIVIEDASEDIPEEEAVCRICLVELAEGGDTLRMDCSCKGELALAHQDCAVKWFSIKGNKTCDVCKQDVRNLPVTLLKISSPPTVVRHTLNASQQRAVTNYRIWQDVPVLVLVSMLAYFCFLEELLVSDLGPRALAISLPFSCILGLLSSIIASTMVSRSYIWAYACFQFAFVILFAHIFYSILNVSAIFSVLLATFTGFGIAISMNSLLMEYIRWETNRQIRSSNQNIISSQQQQETQRQPHQLQRMQQEQHQ* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2636 476 MobiDBLite consensus disorder prediction 12 65 - -
Mtr3g2636 476 MobiDBLite consensus disorder prediction 157 171 - -
Mtr3g2636 476 PANTHER OS02G0165000 PROTEIN 18 461 - -
Mtr3g2636 476 MobiDBLite consensus disorder prediction 73 87 - -
Mtr3g2636 476 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 226 295 IPR013083 -
Mtr3g2636 476 MobiDBLite consensus disorder prediction 149 174 - -
Mtr3g2636 476 Pfam RING-variant domain 240 287 IPR011016 GO:0008270
Mtr3g2636 476 CDD RING_CH-C4HC3_MARCH 240 288 - -
Mtr3g2636 476 ProSiteProfiles Zinc finger RING-CH-type profile. 232 294 IPR011016 GO:0008270
Mtr3g2636 476 MobiDBLite consensus disorder prediction 1 95 - -
Mtr3g2636 476 MobiDBLite consensus disorder prediction 451 476 - -
Mtr3g2636 476 SUPERFAMILY RING/U-box 236 291 - -
Mtr3g2636 476 SMART ringv_2 239 288 IPR011016 GO:0008270
Mtr3g2636 476 PANTHER OS02G0165000 PROTEIN 18 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2636 Mtr-Chr3 40364628 40369003 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2636 234 294 C3H Transcription Factor Family AT2G37950 46.774 3.43e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2636 - - gmx:100779396 614.379