Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2633 ATGGGTCACAAGAACAGATCGAAGAAAAAAAGTGCTGCTTTTGGATCCAAGAAAAAAAAGTCTGCTTTAAATGCTGAGGGTTTAGAAACTTCTTTTGCAGGCATGGCAGTCACTGATGGCAAGGTATCATTATATCGGTGTAAATGCAACTACTGTAAAACAGATATTTCAGGGAAGGCACATATCAAATGCGCTGTGTGTCAAGATTTCAATCTTTGCGTCAAATGCTTTTCTGTTGGTGCTGAGGTGACACCTCATAAAAGCAATCATCCATATCGGGTTATGGAGGATCTATCTTTTCCCCTTACATGTCCAGATTGGAGTGCGCATGAAGAGCGGTTACTTCTTGAGGCCCTTGACATGTATGGATTTGAGAACTGGAATGGTGTTGCTGAACATGTTGGGACGAAAAGCAAACCTGAATGTATCGACCACTATAATGGTGTATATCTGAATTCGCCATGTGCTCCTCTTCCTGATTTGTCTTATTGCAAGGGAAAGAACAAAGAGGAACTCCGTGCCATGGGAAAGCGAGATCAACTCAAGAAAGGGGATAAAGCTTTGGAATGA 570 0.4193 MGHKNRSKKKSAAFGSKKKKSALNAEGLETSFAGMAVTDGKVSLYRCKCNYCKTDISGKAHIKCAVCQDFNLCVKCFSVGAEVTPHKSNHPYRVMEDLSFPLTCPDWSAHEERLLLEALDMYGFENWNGVAEHVGTKSKPECIDHYNGVYLNSPCAPLPDLSYCKGKNKEELRAMGKRDQLKKGDKALE* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2633 189 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 7 184 - -
Mtr3g2633 189 ProSiteProfiles SANT domain profile. 102 154 IPR017884 -
Mtr3g2633 189 ProSiteProfiles Myb-like domain profile. 107 150 IPR001005 -
Mtr3g2633 189 SMART zz_5 43 88 IPR000433 GO:0008270
Mtr3g2633 189 ProSitePatterns Zinc finger ZZ-type signature. 49 76 IPR000433 GO:0008270
Mtr3g2633 189 CDD SANT 107 147 IPR001005 -
Mtr3g2633 189 CDD ZZ_ADA2 48 95 IPR041983 -
Mtr3g2633 189 Pfam Myb-like DNA-binding domain 106 147 IPR001005 -
Mtr3g2633 189 ProSiteProfiles Zinc finger ZZ-type profile. 44 100 IPR000433 GO:0008270
Mtr3g2633 189 Pfam Zinc finger, ZZ type 47 87 IPR000433 GO:0008270
Mtr3g2633 189 Gene3D - 105 151 - -
Mtr3g2633 189 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 7 184 IPR034318 GO:0003713|GO:0006357|GO:0035065
Mtr3g2633 189 SUPERFAMILY Homeodomain-like 100 153 IPR009057 -
Mtr3g2633 189 SMART sant 103 152 IPR001005 -
Mtr3g2633 189 SUPERFAMILY RING/U-box 44 109 - -
Mtr3g2633 189 Gene3D - 39 95 IPR043145 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2633 Mtr-Chr3 40330713 40332723 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2633 16 182 EF-hand Containing Proteins AT3G07740 52.841 1.52e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mtr3g2633 Myb_DNA-binding 1.1e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2633 K11314 - gmx:100779424 248.44