Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2632 ATGGGTGACGCTTCTTATGTCATTGGCATTAAGATTAAAAGAGACAGAGTTCGTAGAATTTTGGGCTTGTCACAAGAGGCTTATATCAATAAGGTCTTAGAGAGGTTTCGGATGAAATATTGTTCACCAAGTGTAGCACCTATTGTGAAGGGTGATAGGTTCCATTTGGAACAATGCCCGAAGACCGATTTTGAGAGGGAACAAATGCTTAATATTCCATATGCTCCCGCTGTTTGGAAGCCTAATGTATGCTTAGGTCGCACACGGCCTGACATTGCATTTGTAATTGAAGACTTACACCATCAAAGTGAGATTGTGGAAGGTTTAGAAGAGCCTCAACTTCTTCAAGCAGGAGCAATGGCTGGAGGCATGGGAATAACTGATGGCAAAGTATCACTATATCACTGTAATTACTGCAAAAAAAATATTTCAGGGAAGATTCACATCAAATGCGCTGTGTGTCAAGATTTTGATCTCTGCATAGAGTGCTTCTTTGTTGGTGCTGAGTTGACTCCTCATAAAAGCAATCATCCATATCGGGTTATGGATAGTCTATCTTTTCCGCTTACATCTCCAGATTGGAGTGCAGGTGAAGAGAAGTTACTTATTGAGGCCATTGACATGTATGGGTTTGGGAATTGGAACGGTGTTGCTGAAAATGTTGGGACAAAAAGCAAATCTCAGTGTATTGACCACTATAATTCTGATTTGTCTTATTCTATGGGAAAGAACAAAGAGGAACTCCTTGCCATGGCAAAGGGACATCAACTCAAGAAAGATTTTCCTTCAAATGCAGAAATGACTCTGAAAGAACCTCACCTTTCTGATGGAATGAACTCTGAAGAATCCAAGAAGGCAGAGACCACTAATCAAAACATGTCTAGGCCAACCTCAGCACGCGATGAAGCTCTTCCAAGTATAACCAAGAAGGCTTCCAATGTGAACCAAAATAATGATGGAGTTAAGGTGGAAGAATCTCAAGCAGGTTGGAGTGCTGGTGAAAAGAAACCTAAATTATCTGGGGAATATAAGCCATCTATGGAAGTGTTGAGAGGGTACAATTCTAACAGAGGTGAATTTGAGATTGAATACGACAATGATGCTGAGCAAGTTTTGGCAGAAATGGAATTTAAGGACACTGATACTGAAGCTGAACGTGAAATGAAACTGCAGGTGCTCCGTGGCTACGGAAAAAAGTTAAATGAACGAAAGCGCAGAAAAGAATTTATACTTGAAAGAAACTTACTTTGTCCAGATCCTTTTGAGAAATTTCTCTCACCTGAAGAGCTTCAAATATGTGAACAGTACAAGGTCTTCATGCGGTTTCACTCAAAAGAAGAGCATGAGGAGTTGCTCCAAACTGCTATTCGAGAACACCGACTGGCCAAAAGAATAAAAGACTTAAAGGAAGCTAGAATTGCTGGCTGTGTAACTTCTGATGAAGCTTATCAATTTATTGAACAAAAGAGGACAAAAGAAGCTGAACAAGGTAACTGTAAAGAAAGTGGTCAGATTGGAACAAGTGGCAAGACAGAATCATTTCCTAGTACCAAGGATGCACCGCCAGCCATACAAGCTATCACAAAGACACTAGAAGAATGGGATATCAGTGATTTTGAAGGGGCTGAATTGCTATCTGAATCTGAGATAAAGCTTTGTAATGAGATCAGAATGCTACCACCCATCTTCCTCAACATTACGCGGATCATGCAGTTAGAAATTTCAAAGGGTAGAGTAACCAAGAAATCTGATGCATATCCACTGTTCAAGTTCTCTCCAAGCAAGATTGACAGAATTTATGACATGCTTGTGGAAAAAGGAGTTGTTCAAGCATAA 1836 0.402 MGDASYVIGIKIKRDRVRRILGLSQEAYINKVLERFRMKYCSPSVAPIVKGDRFHLEQCPKTDFEREQMLNIPYAPAVWKPNVCLGRTRPDIAFVIEDLHHQSEIVEGLEEPQLLQAGAMAGGMGITDGKVSLYHCNYCKKNISGKIHIKCAVCQDFDLCIECFFVGAELTPHKSNHPYRVMDSLSFPLTSPDWSAGEEKLLIEAIDMYGFGNWNGVAENVGTKSKSQCIDHYNSDLSYSMGKNKEELLAMAKGHQLKKDFPSNAEMTLKEPHLSDGMNSEESKKAETTNQNMSRPTSARDEALPSITKKASNVNQNNDGVKVEESQAGWSAGEKKPKLSGEYKPSMEVLRGYNSNRGEFEIEYDNDAEQVLAEMEFKDTDTEAEREMKLQVLRGYGKKLNERKRRKEFILERNLLCPDPFEKFLSPEELQICEQYKVFMRFHSKEEHEELLQTAIREHRLAKRIKDLKEARIAGCVTSDEAYQFIEQKRTKEAEQGNCKESGQIGTSGKTESFPSTKDAPPAIQAITKTLEEWDISDFEGAELLSESEIKLCNEIRMLPPIFLNITRIMQLEISKGRVTKKSDAYPLFKFSPSKIDRIYDMLVEKGVVQA* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2632 611 ProSiteProfiles Myb-like domain profile. 194 237 IPR001005 -
Mtr3g2632 611 ProSiteProfiles SWIRM domain profile. 525 611 IPR007526 GO:0005515
Mtr3g2632 611 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 121 610 IPR034318 GO:0003713|GO:0006357|GO:0035065
Mtr3g2632 611 SUPERFAMILY RING/U-box 134 197 - -
Mtr3g2632 611 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 121 610 - -
Mtr3g2632 611 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 194 241 IPR017930 -
Mtr3g2632 611 MobiDBLite consensus disorder prediction 271 339 - -
Mtr3g2632 611 CDD SANT 194 234 IPR001005 -
Mtr3g2632 611 MobiDBLite consensus disorder prediction 496 519 - -
Mtr3g2632 611 Gene3D - 525 611 IPR036388 -
Mtr3g2632 611 SMART zz_5 130 174 IPR000433 GO:0008270
Mtr3g2632 611 SUPERFAMILY Homeodomain-like 527 610 IPR009057 -
Mtr3g2632 611 SUPERFAMILY Homeodomain-like 186 238 IPR009057 -
Mtr3g2632 611 Gene3D - 192 236 - -
Mtr3g2632 611 Pfam Zinc finger, ZZ type 134 173 IPR000433 GO:0008270
Mtr3g2632 611 ProSitePatterns Zinc finger ZZ-type signature. 136 163 IPR000433 GO:0008270
Mtr3g2632 611 MobiDBLite consensus disorder prediction 308 324 - -
Mtr3g2632 611 SMART sant 190 239 IPR001005 -
Mtr3g2632 611 ProSiteProfiles Zinc finger ZZ-type profile. 131 187 IPR000433 GO:0008270
Mtr3g2632 611 MobiDBLite consensus disorder prediction 284 301 - -
Mtr3g2632 611 MobiDBLite consensus disorder prediction 498 515 - -
Mtr3g2632 611 Gene3D - 129 182 IPR043145 -
Mtr3g2632 611 ProSiteProfiles SANT domain profile. 189 233 IPR017884 -
Mtr3g2632 611 Pfam Myb-like DNA-binding domain 193 234 IPR001005 -
Mtr3g2632 611 CDD ZZ_ADA2 134 182 IPR041983 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2632 Mtr-Chr3 40308226 40326629 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2632 118 608 EF-hand Containing Proteins AT3G07740 48.964 2.82e-151 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mtr3g2632 Myb_DNA-binding 1.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2632 K11314 - gmx:100779424 680.248