Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2628 ATGAAACGAAATTGTTATTTGGATTCATCATCTCACAAATCAATGAATGAGAAGTTGAACGTAAACAAGAAACTTGTTGCAAATCCTCACAATGGAAACCACAAATTTGACGAAAAGGAACTTCAGGCTAGAGCTATAATATGGTTGGCAAGTCAAGAAATTATGGAAGGAAAGAATGGTAGCAACAAAGAATCAATTCCAACACTATCCCTTTCAATGCAACCTAGTGCATTACAAATGCATGCCTCACATGGCTTTTCCATCAAGCGATCACTTCATAATTTCCTTGAGAAGAGAAAGAAAAGGATTCAAAGTCACCACGTCTCTATTGTAACTCATGATAATGATAATAATAGTAGTACAAATTAG 369 0.3496 MKRNCYLDSSSHKSMNEKLNVNKKLVANPHNGNHKFDEKELQARAIIWLASQEIMEGKNGSNKESIPTLSLSMQPSALQMHASHGFSIKRSLHNFLEKRKKRIQSHHVSIVTHDNDNNSSTN* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2628 122 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 111 IPR040390 -
Mtr3g2628 122 Pfam Jas motif 89 104 IPR018467 -
Mtr3g2628 122 PANTHER DIVERGENT CCT MOTIF PROTEIN 1 111 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2628 11 105 Tify Gene Family AT1G30135 38.144 8.05e-07 43.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr3g2628 Jas_motif 5e-05 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2628 - - mtr:MTR_3g081210 249.595