Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2626 ATGGCGCGGCTCCTTACGAAGCTGACGCTAATCGTATCTATTCTCGCGTTCCTCTTCTCTCCGTCGCATTCCGCTGTATTCAGCGTAGATCTCGGTTCCGAATCGCTCAAGGTAGCGGTTGTTAATCTAAAACCCGGTCAAAGTCCGATCTCCGTTGCGATCAACGAAATGTCGAAGCGAAAATCACCTGTTCTCGTTTCATTTCACGACGGCGACCGTCTCCTCGGCGAAGAAGCCGCCGGTTTAGTCGCACGGTATCCGCAAAAAGTTTACTCACAAATGCGTGACTTAATCGGAAAACCATACGCTTCCGCTAAGAAATTTCTAGATTCAATGTACTTACCTTTTGAAGCGAAGGAGAATTCTTCACGCGGTACAGTGAGTTTTGTTGTTGACGAAAACGGTACAGAGTATTCGCCTGAGGAATTAACGGCGATGATTTTGACTTATGCTGCGAATTTGGCGGAGTTTCATTCGAAAATTCCGATCAAAGACGCGGTGATTGCTGTTCCGCCTTATTTTGGACAAGCGGAACGGAGAGGATTGCTTCAGGCGGCGGAGTTGGCGGGGATTAATGTGCTTTCGTTGATTAATGAATACTCCGGTGCGGCGTTGCAGTATGGGATTGATAAGGATTTCTCCAATGAGTCGAGGCATGTTGTTTTTTATGATATGGGTTCGAGTAGTACCTATGCTGCACTTGTGTATTTTTCATCTTATAAGAGTAAAGAGTATGGGAAGACAGTTTCGGTGAATCAATTTCAGGTTAAGGATGTGCGTTGGAACCCTGAACTGGGTGGTCAGCATATGGAATTGAGATTGGTGGAGTATTTTGCTAATGAATTCAATGCAAAAGTTGGTGGTGGAATAGATGTCAGAAAATTTCCCAAGGCCATGGCTAAGTTAAAGAAACAGGTTAAACGAACAAAAGAAATTCTTAGCGCAAACACTGCAGCTCCCATTTCAGTTGAGTCGCTTCACGGTGATGTGGACTTCAGGAGCACAATAACCCGTGAGAAGTTTGAAGAGCTCTGTGAAGATATTTGGGAAAAATCTCTTTTACCGCTGAAAGAGTTGCTCGAGCATTCAGGCTTGTCAACAGATCAAATATATGCAGTGGAGTTAATTGGAGGTGCTACCAGAGTGCCAAAATTACAGGCTAAGCTTCAAGAGTTCCTTGGTAGAAAAGAACTTGATAGGCATCTCGATGCTGATGAAGCAATAGTTCTTGGTGCTGCTCTGCATGCTGCAAATATAAGTGACGGAATCAAATTAAACCGCAAATTAGGAATGGTTGATGGTTCCTTATATGAGTTTGTGGTTGAATTGAATGGTCCTGATCTTCTGAAAAGTGAAAGTTCAAGGCAGTTACTTGTACCCCGGATGAAGAAACTCCCGAGTAAGATGTTCAGATCCATTAATCATGACAAAGATTTTGAAGTTTCACTGGCTTATGAAAGTGAACATCATTTGCCACCTGGTGTTACCTCTCCTTTAATTGCTCAATACCAGATATCTGGATTAACAGAAACAAGCGGGAAATACTCATCTCGGAATCTGTCATCCCCCATTAAGGCAAATATACATTTCTCTCTTAGTAGAAGTGGAATTCTTTCTCTGGATCGAGCAGATGCTGTTATTGAAATTACAGAGTGGGTGGAAGTTCCCAAGAAAAACTTGACCATAGAGAATTCAACTATTTCGTCAAATGTATCAGATGATTCTGGTGCTAAGAACAATTCTGAGGAAAACAATGAAAGTGTGCAAAGTGATAGTGGTATTAATAAGACGTCCAACACGAGCGCAGAAGAGCAAGCTGCTGCTGAACCCGCTACCGAAAGAAAGCTGAAAAAGCGGACCTTTAGGGTACCATTGAAGATTGTTGAGAAGTTAACAGGACCAGGGATGTCTCTATCGAAAGATTTTCTTGCTGAAGCTAAAACAAAATTACAAGCACTAGACAAAAAAGATGAAGAAAGGAAAAGGACAGCAGAGTTCAAAAATAATTTAGAAGGATATATATATACCACTAAGGAAAAGATTGAAATTCTTGAGGAGTTTGAAAAAGTTTCTACGAGTGAGGAACGTCAGTCCTTTGTTGAGAAGCTTGACGAGGTGCAAGATTGGTTGTATACAGATGGTGAAGATGCCAACGCTACCGAGTTTCAAGAGCGTCTAGATAAGTTAAAAGCTGTTGGAGATCCAATTTTCTTCAGGTTAAAAGAGCTTACAGCTCGACCAGCGGCAGTTGAGCATGCCCGTAAATACATTGATGAGCTGAAACAGATTGTAGAAGAGTGGAAAGCAAAGAAGTCTTGGCTCCCAAAAGAACGTGTAGATGAGGTGATTGATGTTGCAGAAAAGTTAAAGAACTGGTTGGATGAGAAAGAAACTGAACAAAAGAAGACTTCTGGATTCAGTAAGCCTGCATTTACATCTGAAGAAGTAATCTTAAAGGTGTTAGATCTACAAAACAAGGTTGCCAGTATTAATAGAATCCCCAAGCCCAAGCCCAAGATTCAGAAGCCTGCAAAGAACGAAACTGAGAGCAATGAGCAGAATACCGATAATTCTAATTCTGATCAATCCTCTAATTCAGAAGGCCAAAACGAAGAAAAGGTTGACGAGCAACCTGAAACTCGTGATGAGTTATGA 2655 0.4185 MARLLTKLTLIVSILAFLFSPSHSAVFSVDLGSESLKVAVVNLKPGQSPISVAINEMSKRKSPVLVSFHDGDRLLGEEAAGLVARYPQKVYSQMRDLIGKPYASAKKFLDSMYLPFEAKENSSRGTVSFVVDENGTEYSPEELTAMILTYAANLAEFHSKIPIKDAVIAVPPYFGQAERRGLLQAAELAGINVLSLINEYSGAALQYGIDKDFSNESRHVVFYDMGSSSTYAALVYFSSYKSKEYGKTVSVNQFQVKDVRWNPELGGQHMELRLVEYFANEFNAKVGGGIDVRKFPKAMAKLKKQVKRTKEILSANTAAPISVESLHGDVDFRSTITREKFEELCEDIWEKSLLPLKELLEHSGLSTDQIYAVELIGGATRVPKLQAKLQEFLGRKELDRHLDADEAIVLGAALHAANISDGIKLNRKLGMVDGSLYEFVVELNGPDLLKSESSRQLLVPRMKKLPSKMFRSINHDKDFEVSLAYESEHHLPPGVTSPLIAQYQISGLTETSGKYSSRNLSSPIKANIHFSLSRSGILSLDRADAVIEITEWVEVPKKNLTIENSTISSNVSDDSGAKNNSEENNESVQSDSGINKTSNTSAEEQAAAEPATERKLKKRTFRVPLKIVEKLTGPGMSLSKDFLAEAKTKLQALDKKDEERKRTAEFKNNLEGYIYTTKEKIEILEEFEKVSTSEERQSFVEKLDEVQDWLYTDGEDANATEFQERLDKLKAVGDPIFFRLKELTARPAAVEHARKYIDELKQIVEEWKAKKSWLPKERVDEVIDVAEKLKNWLDEKETEQKKTSGFSKPAFTSEEVILKVLDLQNKVASINRIPKPKPKIQKPAKNETESNEQNTDNSNSDQSSNSEGQNEEKVDEQPETRDEL* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2626 884 PANTHER BNAC07G50110D PROTEIN 10 874 - -
Mtr3g2626 884 MobiDBLite consensus disorder prediction 830 884 - -
Mtr3g2626 884 CDD HYOU1-like_NBD 28 417 - -
Mtr3g2626 884 MobiDBLite consensus disorder prediction 847 867 - -
Mtr3g2626 884 MobiDBLite consensus disorder prediction 567 615 - -
Mtr3g2626 884 Gene3D - 92 146 - -
Mtr3g2626 884 MobiDBLite consensus disorder prediction 868 884 - -
Mtr3g2626 884 PANTHER HSC70CB, ISOFORM G-RELATED 10 874 - -
Mtr3g2626 884 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 665 747 IPR029048 -
Mtr3g2626 884 Pfam Hsp70 protein 27 738 IPR013126 GO:0005524|GO:0140662
Mtr3g2626 884 SUPERFAMILY Actin-like ATPase domain 26 211 IPR043129 -
Mtr3g2626 884 Gene3D - 638 752 IPR029048 -
Mtr3g2626 884 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 427 569 IPR029047 -
Mtr3g2626 884 SUPERFAMILY Actin-like ATPase domain 217 418 IPR043129 -
Mtr3g2626 884 PRINTS 70kDa heat shock protein signature 25 38 - -
Mtr3g2626 884 PRINTS 70kDa heat shock protein signature 57 69 - -
Mtr3g2626 884 PRINTS 70kDa heat shock protein signature 166 186 - -
Mtr3g2626 884 PRINTS 70kDa heat shock protein signature 370 386 - -
Mtr3g2626 884 PRINTS 70kDa heat shock protein signature 402 422 - -
Mtr3g2626 884 Gene3D Actin; Chain A, domain 4 266 351 - -
Mtr3g2626 884 MobiDBLite consensus disorder prediction 567 606 - -
Mtr3g2626 884 Gene3D - 212 399 - -
Mtr3g2626 884 Coils Coil 750 770 - -
Mtr3g2626 884 ProSitePatterns Heat shock hsp70 proteins family signature 3. 373 387 IPR018181 -
Mtr3g2626 884 Gene3D - 29 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2626 Mtr-Chr3 40232156 40241017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2626 27 544 Calmodulin-binding Proteins AT3G12580 28.190 5.76e-62 220