Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2611 ATGGATTCTGAAATTGATGATGTTGGTGTTGTAGAGAAAGATCCAACTTTGCGTTATGCACGGTATGATGAAATGTTAGGGAAAGGAGCTTTCAAGACTGTATATAAAGCTTTTGATGAAGTAGATGGAATAGAAGTTGCCTGGAATCAAATTAGTATAGAGGATGTTATGCAATCACCACAGAATTTGGAAAAGTTGTATTCTGAGGTTCACTTGCTCAAGTCACTGAAGCACGAAAATATCATTAAGATGTATAGCTCTTGGGTGGACGAAAAGAGCAGCAATATCAACATGATAACTGAATTGTTCACATCTGGGAGTTTGAGGCAGTATCGTAAGAAACATAAGAATGTGGATATGAAGGCTATCAAGAACTGGGCGAGGCAGATTCTTCGTGGGTTGTGTTTTCTGCACAGTCACAACCCACCTGTTATTCACAGGGATCTAAAATGTGATAATATTTTCGTTAACGGGAACAATGGGCAAGTTAAGATTGGAGATCTAGGATTGGCAATTGTCATGCAGCAACCTACTGCCCGGAGTGTCATTGGTACTCCAGAATTCATGGCCCCAGAGCTTTATGAGGAAGAATACAATGAACTTGTTGACGTATATTCCTTTGGCATGTGTATCTTGGAAATGATCACCTGCGAGTACCCGTATAGTGAATGCAAAAATCCGGCGCAGATATATAAGAAAGTTACCTCTGGTATAAAACCGGCTTCTCTTGCTAGAGTGAATGATCCTGAAGTGAAGCAATTTATAGAGAAGTGTTTAGTTCCAGCGTCTATGAGATTGCCTGCATCTGAACTGCTGAAAGATCCATTCCTTGCCACTGGAAATACGAAGGAGATCTATCATGATAACCTGCTGCTGCCAAATCCCCCCAGCAAATCATTGAATCCACCAACTTGTGAGCCCCATCCGATGGAGATAGATTCAAACGTCAAGCATACATCACCTGCCTCCACTGTGGAAAGAGATAAAGAAACTTCTCAAGTTTCATCAAATCATGATATCCTGAGGAAGACGGAAAACAATGAATTTAGATTGAGAGGGGAGAAGAATGCTGATAGGACAATTTCACTGACACTGCGAATTGCTGATGCTAATGGTGGAGCTAGGAATATTCATTTTCCATTCTATATCGATTCCGACACAACAATTTCAATTGCGGAGGAGATGGTGGAACATCTGGAACTCAAGGATGAGGATGTAGCTGTCATTGCTGAGCTAATACACAACATGATTTTTAAGCTTGTGCCTGACTGGAAACCCTTGTGCGAGAACTCATCTGGAACAGATAATTTGTACAGGCCTTTGGAACCTCAGAATGAACAGTTAAACTGCCATTGGACCTTGGGGTCAAATAATTTTGATATGAAGTCAATGTATGAGGATTTAGGTCACTCACAACTTGATGGGGAAGATCAGGATAAACAAGAATCTGTTTCGTCAGATATTTCAGCTGAGTATGGGACTGTAATTGCCACTGATGCTAAAGGTGTAGAGCAAAATTGTTTTATTCTTCATGAATGTTGCAAGGGATCGAACGGCTTAAACACCAATCCAGATGTCAGAATTTGTGGTCAAGAAGATGGAAACAGTAATCAATCAGAGAACTCAGTAGTCTCATGTTGCAGTCCATCCGAAAATCTTGACAGGTTGAGCAAATGTTCTCTTACTGCACTTGACCAAGATCATTTAGATGAGCTACAGTTGGAGATTGAAGCAATTGAAATCCAGTATCAGCAAAGTTTTCGCGAGCTTATGAAGATGAGGGAGGAAGCCATAGAAAATGTCAAAAAGATGGACTTCAAAGAAGAATATATCAGTTATGTAACGCACGAGGGTGATTTTCTGATAGTTTTGGTTGATTTAATTTGTTGA 1890 0.4026 MDSEIDDVGVVEKDPTLRYARYDEMLGKGAFKTVYKAFDEVDGIEVAWNQISIEDVMQSPQNLEKLYSEVHLLKSLKHENIIKMYSSWVDEKSSNINMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILRGLCFLHSHNPPVIHRDLKCDNIFVNGNNGQVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDVYSFGMCILEMITCEYPYSECKNPAQIYKKVTSGIKPASLARVNDPEVKQFIEKCLVPASMRLPASELLKDPFLATGNTKEIYHDNLLLPNPPSKSLNPPTCEPHPMEIDSNVKHTSPASTVERDKETSQVSSNHDILRKTENNEFRLRGEKNADRTISLTLRIADANGGARNIHFPFYIDSDTTISIAEEMVEHLELKDEDVAVIAELIHNMIFKLVPDWKPLCENSSGTDNLYRPLEPQNEQLNCHWTLGSNNFDMKSMYEDLGHSQLDGEDQDKQESVSSDISAEYGTVIATDAKGVEQNCFILHECCKGSNGLNTNPDVRICGQEDGNSNQSENSVVSCCSPSENLDRLSKCSLTALDQDHLDELQLEIEAIEIQYQQSFRELMKMREEAIENVKKMDFKEEYISYVTHEGDFLIVLVDLIC* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2611 629 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 604 - -
Mtr3g2611 629 ProSiteProfiles Protein kinase domain profile. 20 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2611 629 Gene3D Transferase(Phosphotransferase) domain 1 103 284 - -
Mtr3g2611 629 Gene3D Phosphorylase Kinase; domain 1 4 101 - -
Mtr3g2611 629 Coils Coil 569 596 - -
Mtr3g2611 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Mtr3g2611 629 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 361 417 IPR024678 GO:0004674|GO:0005524
Mtr3g2611 629 PANTHER WNK KINASE 1 604 - -
Mtr3g2611 629 Pfam Protein kinase domain 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2611 629 SUPERFAMILY Protein kinase-like (PK-like) 23 325 IPR011009 -
Mtr3g2611 629 CDD STKc_WNK 18 277 - -
Mtr3g2611 629 Gene3D - 359 436 - -
Mtr3g2611 629 SMART serkin_6 20 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2611 Mtr-Chr3 40092850 40096486 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2611 3 603 MAP Kinase Kinase Kinase AT5G41990 52.217 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Mtr3g2611 Pkinase 5.4e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2611 K08867 - gmx:100783717 863.988