Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2590 ATGGAAGATTGTTCACAAAACTCAAAATGGAAGTATCATGTTTTCTTGAGTTTTAGGGGAGAAGACACGCGCTTAGGCTTCACCGATCACCTATATGCAGCCTTGGTGCGCAAGAGTATAATAACGTTCAGAGATGATGAAGAACTTGCAAGAGGTGAAGTCATCTCACAAAAACTACTCCTTGCAATTGAAGAATCTCTCTCAGCAGTTCTCATAATCTCCAAAAACTATGCGAACTCAGCTTGGTGTTTGGATGAGTTAGTCAAGATTCTTGAATCCAAACGTTTGTTAGGACAACAAGTGTTCCCAGTCTTCTATGGTGTAGATCCCTCCGATGTAAGGAATCAAAGGGGAAGTTTTGCCGAGGCTTTTAAGAAACATGAAGAGAAATTTAGTGAAAGCAAAGAGAAAGTGCAAAAGTGGAGAGATGCATTGAGAGAGGTTGCCAACTTGTCGGGGTGGGACTCCAAAGACCAACATGAAACTAAACTCATTGAAGAAGTTATTGCACAAGTATGGAAAAGACTAGAACTCAAGTTCCCATCCTATAATGATGGTCTGGTTGCAATTGATGTAAGATTGGAAGAACTATATTCAACTCTGAAGCTAGGACTGGAGGATGTTCATTTCATAGGGATATGGGGTATGGGCGGGATAGGAAAAACAACTCTTACTACAGCTCTCTTCAAAAAAATTAAAAGCCAATTTGATGTAAGTTGCTTCATTGCTAATGTCAGAGAGGTCTCTGGGGAAAGAAACCAATATCTCCAACAGTTACAAAATAAAATTCTTTCTCATCTGAACATAAAAGGAATGGTAATTGAAACATTAAGCCAAGGAAAGGACAGCTTGAGAAACCTTTTATCCAACAAAAAGGTTCTTCTTGTCCTTGATGATGTAAGTTCTAAAAGCCAACTTGAGAATTTGGCAGGAAGCCAAGAATGGTTTGGTCGAGGTAGTAGAATTATAGTCACAACTAGGGATAAGCACCTGTTGATATCGCATGATGTATTGTTTGAAATGTATGAGAGTAAAATTTTAAATAAAAGTGAATCCCTTCATCTTTTTTGTGAAAAAGCATTTAAAGAGGATGCACCTAAAGAGGGTTTTGTGGAGTTGTCTGAAAGTGTGGTTGAATATGCTCGAGGCCTTCCTTTGGCACTTGAAGTGTTGGGTTCTTTTCTCTGTGGAAGAAGTTTATCTGATTGGGAAGATGCTTTAATCAAGATTAAACAAGTTCCACATGATGATATCCTAAACAAACTTAGAATAAGCTATGACATGTTAGAAGATGAACACAAAACCATATTTCTAGATATTGCATGCTTTTTTAAGGGATGGTACAAACATAAAGTGATACAAATATTGGAAAGTTGCGGCCTTCATCCAACTGTTGGAATAAATGTTCTCATTGAAAAATCTTTACTAACTTTCGATGGAAGAGTTATATGGTTGCATGATATGCTTGAAGAAATGGCTAAAACTATAGTTATTCAAGAATCCCCTAATGATCCTGGTAGACGAAGTAGATTGTGGTCTCTGGAGGATATTGATCAAGTGCTGAAAAAAAACAAGGGAACTGAAATTGTGCAAGGTATAGTTTTGAAATCCTCACCGTCTACGCTGTATGAAGCACATTGGGACCCTGAGGCGTTCACAAAGATGGGAAATCTAAGGTTACTCATTATATTATGTGATTTGCATCTTTCCCTTGGTCTGAAATGTCTTTCTAGCTCACTAAAAGTGCTTGTATGGTGGGGATATCCACTGAATTCTCTACCAGTTGGGATTCAACTAGATGAGCTTGTACATTTACAAATGATCAATAGTAAAATTAAACAGTTGTGGAATGGAAATGAGTATTATGGAAAGCTGAAAGTAATTGATTTGAGTAACTCCAAAGATTTACGTCAAACTCCAAATGTCTCTGGAATTCCGAATCTTGAAGAGCTGTATTTTAATGATTGTATAAAACTTGTTGAAGTTCACCAATCCATCAGACAACATAAAAAGCTTAGGATATTGAGCTTGATGGGATGTGTAGATCTGAAAATCTTTCCAAAGAAATTGGAAATGTTTTCCTTGAAGATGCTATTTCTTTCATACTGCTCAAACATTAAAAGACTTCCTGATTTTGGGAAAAATATGACATGCATTACAGAGCTTAACTTATTGAATTGTGAAAATCTTCTTTCCCTTCCAAACAGCATTTGTAACCTGAAGTCTCTCAGAATTCTCAACATATCAGGATGTTCTAAAATTTGTAACCTGCCAGATGGTATAAATCAAATTATGGCTTTGGAGGACATTGACTTGAGTAGAACTGCTATTAGAGATTTGGATCCATCCCTACTTCAGTTAGGAAATCTCAAAAGATTATCTTTAAGAAGCTGTCGTGATCCAGCTACCAATTCAAGCTGGAACTTTCATCTGCCTTTTGGCAAGAAGTTCAGCTTTTTCCCAGCTCAAACAACTAGCTTAACTTTGCCCCCTTTTCTATCGGGCCTTTCCTCATTAACTGAATTAGATTTAAGCGATTGCAATCTCACCGATAGTTCAATTCCTCACGATATTGATTGCTTATCATCATTGGAGAGACTAATCCTTAGTGGGAATAATTTTGTATGCCTGCCAACTCACTACATTTCTAATCTTTCAAAGCTTCGTTATCTTGAATTGGAAGATTGTCCACAGCTTCAATCTTTACCAATGCTTCAGCCTCAAGTACGCTTGTACGTAACAGATTCAGATGCAAGGGAAGCTTATGCATTGGATCCACAGAAGATATGGAAGCTGTTTGAATCAAGTGACAAGAAACTCTTACACTCATCTCTGTATCGTGTTCCTGACTTCCCTTATCCTATGTACTTCGAAATGCCATCGAGATTTGATAATCAGAATTTTTTTCCCTTGACCTCGTCATATGTGTCAAAACTTGATGCAATTGCATCAGTAAAAGTGGATATCCCAGATGATTGTCTTTTAAGTGACTGGTGGGGGGTGGCTGTATTTGTGGCCTTAGAAGCTGAAGGTTTTGTGGCCAGACACATGCGTTTGAGTTGGAACTTTGATACTCTGGGGCCTGAAGATGGCCCCTCCTTGTCACTGCTTACAGGTTCAACGGCAGCCAATGATTCTTACCTCTTCACACTGGTAGTGAGCGGCGACTTTATATATATTCAGAGACACCTTAGTGGGGACCCAAAGTTCATGCGGAAGCAATTCAGCAAGCACAGAAAGCCAGAGTTAAGCGAAAACAGTTCATTGCGTTTTGAAGTACAAGTGGAAGGGTGCAAGATAAGGAAGTGTGGGTGGCGTATGTTGCGCAAGGAAGATTATCTTGAAGACTTGAAAATGCTGAACAGTAGTGGACTTGTTGTAGCACATTCCGATTCCGGGCATTCAGCTGGTATGAACCAATCATCTGAGGTTGAATCCAAGGTGAAGGAAACTACTGCTTTGGATGTGCAGAACATAGAAAGGTCCAATGAGAACTTCTCTTTGGGGAAAATGCTTCACAATATTAGACAAGGACTTGGTGTAAGTATGCTAGCTTTGATATCAATGATGGTTGGGGCTACAATATTCCATTCGCCTGTGAATGGTTTGCGCTTCAAAAAGTCTGCCCCAACAAATGAGACCGTAACTAATAAACTATTCAAATCACAATGGATTTCCTCCAATGATATTGTACTTAAGGTCAATACGCCGCAATTGCCAGACAATCCTCGTAACAGAAAAGTGAGCCAGAGGTTGTCATTTCCAATATACCAGCCACCAAGGAGGTTGAGTTTCTCTCAGAGCCACTTTTGTTTAACTTGA 3822 0.3878 MEDCSQNSKWKYHVFLSFRGEDTRLGFTDHLYAALVRKSIITFRDDEELARGEVISQKLLLAIEESLSAVLIISKNYANSAWCLDELVKILESKRLLGQQVFPVFYGVDPSDVRNQRGSFAEAFKKHEEKFSESKEKVQKWRDALREVANLSGWDSKDQHETKLIEEVIAQVWKRLELKFPSYNDGLVAIDVRLEELYSTLKLGLEDVHFIGIWGMGGIGKTTLTTALFKKIKSQFDVSCFIANVREVSGERNQYLQQLQNKILSHLNIKGMVIETLSQGKDSLRNLLSNKKVLLVLDDVSSKSQLENLAGSQEWFGRGSRIIVTTRDKHLLISHDVLFEMYESKILNKSESLHLFCEKAFKEDAPKEGFVELSESVVEYARGLPLALEVLGSFLCGRSLSDWEDALIKIKQVPHDDILNKLRISYDMLEDEHKTIFLDIACFFKGWYKHKVIQILESCGLHPTVGINVLIEKSLLTFDGRVIWLHDMLEEMAKTIVIQESPNDPGRRSRLWSLEDIDQVLKKNKGTEIVQGIVLKSSPSTLYEAHWDPEAFTKMGNLRLLIILCDLHLSLGLKCLSSSLKVLVWWGYPLNSLPVGIQLDELVHLQMINSKIKQLWNGNEYYGKLKVIDLSNSKDLRQTPNVSGIPNLEELYFNDCIKLVEVHQSIRQHKKLRILSLMGCVDLKIFPKKLEMFSLKMLFLSYCSNIKRLPDFGKNMTCITELNLLNCENLLSLPNSICNLKSLRILNISGCSKICNLPDGINQIMALEDIDLSRTAIRDLDPSLLQLGNLKRLSLRSCRDPATNSSWNFHLPFGKKFSFFPAQTTSLTLPPFLSGLSSLTELDLSDCNLTDSSIPHDIDCLSSLERLILSGNNFVCLPTHYISNLSKLRYLELEDCPQLQSLPMLQPQVRLYVTDSDAREAYALDPQKIWKLFESSDKKLLHSSLYRVPDFPYPMYFEMPSRFDNQNFFPLTSSYVSKLDAIASVKVDIPDDCLLSDWWGVAVFVALEAEGFVARHMRLSWNFDTLGPEDGPSLSLLTGSTAANDSYLFTLVVSGDFIYIQRHLSGDPKFMRKQFSKHRKPELSENSSLRFEVQVEGCKIRKCGWRMLRKEDYLEDLKMLNSSGLVVAHSDSGHSAGMNQSSEVESKVKETTALDVQNIERSNENFSLGKMLHNIRQGLGVSMLALISMMVGATIFHSPVNGLRFKKSAPTNETVTNKLFKSQWISSNDIVLKVNTPQLPDNPRNRKVSQRLSFPIYQPPRRLSFSQSHFCLT* 1274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2590 1273 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 7 627 - -
Mtr3g2590 1273 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 700 799 - -
Mtr3g2590 1273 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 154 IPR035897 -
Mtr3g2590 1273 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 627 IPR044974 GO:0006952
Mtr3g2590 1273 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 700 799 IPR044974 GO:0006952
Mtr3g2590 1273 SMART till_3 11 151 IPR000157 GO:0007165
Mtr3g2590 1273 Gene3D - 176 337 IPR027417 -
Mtr3g2590 1273 ProSiteProfiles TIR domain profile. 10 176 IPR000157 GO:0007165
Mtr3g2590 1273 Gene3D Ribonuclease Inhibitor 692 764 IPR032675 -
Mtr3g2590 1273 Gene3D Ribonuclease Inhibitor 544 691 IPR032675 -
Mtr3g2590 1273 Gene3D - 5 175 IPR035897 -
Mtr3g2590 1273 Pfam TIR domain 11 182 IPR000157 GO:0007165
Mtr3g2590 1273 PRINTS Disease resistance protein signature 210 225 - -
Mtr3g2590 1273 PRINTS Disease resistance protein signature 287 301 - -
Mtr3g2590 1273 PRINTS Disease resistance protein signature 381 395 - -
Mtr3g2590 1273 PRINTS Disease resistance protein signature 738 754 - -
Mtr3g2590 1273 Gene3D Ribonuclease Inhibitor 765 932 IPR032675 -
Mtr3g2590 1273 Pfam NB-ARC domain 206 412 IPR002182 GO:0043531
Mtr3g2590 1273 Gene3D - 346 430 IPR042197 -
Mtr3g2590 1273 SUPERFAMILY "Winged helix" DNA-binding domain 417 522 IPR036390 -
Mtr3g2590 1273 SUPERFAMILY L domain-like 546 907 - -
Mtr3g2590 1273 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 440 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2590 Mtr-Chr3 39865497 39873588 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2590 7 793 WRKY Transcription Factor Family AT4G12020 30.409 1.29e-88 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2590 - - mtr:MTR_3g080470 2386.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2590 3 39865497 39873588 Mtr3g2590 3 39865497 39873588 ECH