Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2588 ATGGGTTGTGTTGATTTGAAAATCTTTCCAAAGAAATTGGAAATGTTTTCCTTGAAGATGCTCTTTCTTTCTGACTGCTCAAACATTAAAAGACTTCCCAATTTTGGGAAAAATATGACATGCATTACGGAGCTTAACTTATTGAATTGCAAAAATCTTATATCCCTTCCAAACAGCATTAGTAACTTGAAGTCTCTCAGAATTCTCAACATATCAGGATGTTCTAAAATTTGTAACCTGCCAGATGGTATAAATCAAATTATGGCTTTGGAGGACATTGACTTGAGTAGAACTGCTATTAGAGATTTGGATCCATCCCTACTTCAGTTAGGAAATCTCAAAAGATTATCTTTAAGAAGCTGTCGTGATCCAGCTACCAATTCAAGCTGGAACTTTCATCTGCCTTTTGGCAAGAAGTTCAGCTTTTTCCCAGCTCAAACAACTAACTTAACTTTGCCCCCTTTTCTATCGGGCCTTTCCTCATTAACTGAATTAGATTTAAGCGATTGCAATCTCACCGATAGTTCAATTCCTCACGATATTGATTGCTTATCGTCATTGGAGAGACTAATCCTTAGTGGGAATAATTTTGTATGCCTACCCACTCACCACCTCGCTAATCTTTCAAAGCTTCATTATCTTGAATTAGAAGATTTCCCACAACTTCAATCTTTACCTATTCTTCCACCTCATGTACGCATGTATGTAACAGATTCAGATGCTAAGGAAGCTAATGCAGTAGATCCACAAAAGATATGGAAGGTGTTTGAATCAAGTGAAAAAGAATTCTTAGTCACCTGTACCTCAAAGGTTTGA 816 0.3676 MGCVDLKIFPKKLEMFSLKMLFLSDCSNIKRLPNFGKNMTCITELNLLNCKNLISLPNSISNLKSLRILNISGCSKICNLPDGINQIMALEDIDLSRTAIRDLDPSLLQLGNLKRLSLRSCRDPATNSSWNFHLPFGKKFSFFPAQTTNLTLPPFLSGLSSLTELDLSDCNLTDSSIPHDIDCLSSLERLILSGNNFVCLPTHHLANLSKLHYLELEDFPQLQSLPILPPHVRMYVTDSDAKEANAVDPQKIWKVFESSEKEFLVTCTSKV* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2588 271 Gene3D Ribonuclease Inhibitor 2 88 IPR032675 -
Mtr3g2588 271 Gene3D Ribonuclease Inhibitor 89 234 IPR032675 -
Mtr3g2588 271 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 151 226 - -
Mtr3g2588 271 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 6 123 - -
Mtr3g2588 271 SUPERFAMILY L domain-like 12 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2588 Mtr-Chr3 39858930 39861819 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2588 2 116 WRKY Transcription Factor Family AT4G12020 33.333 5.29e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2588 - - mtr:MTR_3g080460 519.235