Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2570 ATGCTATGTCTAGCAAACGTGCTTGACGGGTTGGGAGAAGAAACAAAAAAAAGGTACACAAACGTAATGAAAGGGGCACTTCTCAGTATCAAAGCACATACCAACCATAGTTTTACCTCAACTTCAATGAGAATCATGGTTACATTATTCAGTGCTACCATACTTACTCTAATCTTATTGCTTAATTTCCACATCCCACAAACAAAATCTCAGCAAGAATATCTAGACAACCATCAACTAGATTGTGATGACCCTTCCAAATCTACATATGGTAATATCTGCAACAGCATCAACTCCTGTCAATCTTACCTCACCTTCAAATCAAGCCCTCCTCATTACAACACTCCAGCCACCATAGCTTATCTCTTGAACTCAACAGTCCCTCTAATTGCCAATGCCAACAACATCTCATATGTTGATCCTATTCCGACGGACACCATGATTACTGTACCAGTTAACTGTTATTGCTCCGGTCACTACTACCAGCATAATTCCTCATACACATTGAAGACTGAGGATGAAAACTACTTCACTCTTGCCAATAACACCTATGAGTCACTCACAACATGTCAGGCTCTTGATGCTCAGAATATATATGGACTCACAAACCTCACTGCAGGGCTCAATATGCATGTTCCACTCAGGTGTGCTTGTCCTACCTCCAAGCAAATTGAAAATGGATTCAAGTATATTCTTACATACCTGGTCTCCGAAGGAGAATATCCTGAACTTATTGCTGAGATTTTTGGGGTTGATTCACAGAGCGTCTTGGATGCAAACAAGCTTATTGAGGATCAAGTTATCTTCTACTTCACTCCATTGATGGTGCCTCTAAAAGACAAGCCACCTACCAAGATACAAAGGACACTACCGCCACCATCAACACCACTGTCAAAACCTCATGTGGAAAATCTAGCTAGGAATAAAGATTCAAGCTCTTCTAAGAAATGGGTGGTTGTTGGAATTGCTGTTGGAGCTGCATTCCTGCTTCTTATCTTTTTTGTGTTGTTATTCTGCTTTTGTCAGCAGCATAAGAACAAAAAAAAATTGTCTTCTGCAGCTACCAAAACCACCACTGAGGAAGTCTCAAATACCAACACAAGTATAACCAACCCCTCCTTTTCTCTGTGTTCCGAAGGGCTTCGTTATGCTTTTGAGTCTTTGACAGTGTATGAATTTGAGGAGCTGCATAAAGCAACGAGCTTTTTCAGTGAAGCTAACAGGATAAGGGGTTCTTCAGCTTACCGAGCAAGCTTGAAGGGTGATGATGCTGCAGTTAAGGTTCTCAAAGGCGATGTCTCTGTGGAGATCAATATTCTAAGGAGAATCAACCATGCCAACATAACAAGGATCTCTGGGCTCAGTGTACACAAAGGAAGCACATATCTTGTTTATGAGTTTGCCGAAAATGGTTCTCTTGATGATTGGATTCACTTTAGCAAGTGCATAAACTCTGTGGCTCTGACTTGGAAGCAAAGAGTTCAGATTGCTCAGGATGTGGCGGATGCTTTGAATTACCTTCACAACTATGTCAACCCTCCACATATCCACAAGAATTTGAAAAGTGACAATGTGCTTTTGGATGGAAATTTTAGAGGTAAACTTTGTAACTTTGGATTAGCAAGAGTGGTAGATGATTACGATTTTGGTGAAGAGGGGTTCCAATTTACAAGGCATGTTGTTGGCACTCATGGTTACATGCCACCTGAGTATATCGAGAACGGTTTGGTTAGTCCAAAGATGGATGTTTTTGCTTTTGGTGTTGTGATGTTGGAGCTTCTTTCGGGAAGAGAAGCAATTGTTGGTGACAAAAATGGAGGAGAGAAGCGGCTATCAGCTGTCGTGAGTGAAGTACTTGAAGGCGATAATGTGAGGGAGAAACTTCATGCTTTCATGGATCCAACTTTGAGGGGTGAATACCCATTGAATATGGGATATTCCATGGCAGAGATTGCCAAACGCTGTGTTGCCAATTACCACAATTTGCGTCCAAACGTTTCTGAAGTTTTGGTTATACTGTCTAAGATTCAATCCTCTTCAGTAAATCGGGATCCATCTGATGTGATGGAGAAAACTTTTGACCAAATTTCAGATTGGAAAATATAA 2106 0.4098 MLCLANVLDGLGEETKKRYTNVMKGALLSIKAHTNHSFTSTSMRIMVTLFSATILTLILLLNFHIPQTKSQQEYLDNHQLDCDDPSKSTYGNICNSINSCQSYLTFKSSPPHYNTPATIAYLLNSTVPLIANANNISYVDPIPTDTMITVPVNCYCSGHYYQHNSSYTLKTEDENYFTLANNTYESLTTCQALDAQNIYGLTNLTAGLNMHVPLRCACPTSKQIENGFKYILTYLVSEGEYPELIAEIFGVDSQSVLDANKLIEDQVIFYFTPLMVPLKDKPPTKIQRTLPPPSTPLSKPHVENLARNKDSSSSKKWVVVGIAVGAAFLLLIFFVLLFCFCQQHKNKKKLSSAATKTTTEEVSNTNTSITNPSFSLCSEGLRYAFESLTVYEFEELHKATSFFSEANRIRGSSAYRASLKGDDAAVKVLKGDVSVEINILRRINHANITRISGLSVHKGSTYLVYEFAENGSLDDWIHFSKCINSVALTWKQRVQIAQDVADALNYLHNYVNPPHIHKNLKSDNVLLDGNFRGKLCNFGLARVVDDYDFGEEGFQFTRHVVGTHGYMPPEYIENGLVSPKMDVFAFGVVMLELLSGREAIVGDKNGGEKRLSAVVSEVLEGDNVREKLHAFMDPTLRGEYPLNMGYSMAEIAKRCVANYHNLRPNVSEVLVILSKIQSSSVNRDPSDVMEKTFDQISDWKI* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2570 701 MobiDBLite consensus disorder prediction 282 301 - -
Mtr3g2570 701 Gene3D Phosphorylase Kinase; domain 1 377 467 - -
Mtr3g2570 701 SUPERFAMILY Protein kinase-like (PK-like) 385 670 IPR011009 -
Mtr3g2570 701 PANTHER PROTEIN LYK5 59 692 - -
Mtr3g2570 701 Gene3D Transferase(Phosphotransferase) domain 1 468 697 - -
Mtr3g2570 701 ProSiteProfiles LysM domain profile. 232 276 IPR018392 -
Mtr3g2570 701 Pfam Protein kinase domain 431 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2570 701 ProSiteProfiles Protein kinase domain profile. 344 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g2570 701 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 59 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2570 Mtr-Chr3 39726415 39728678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2570 52 687 Receptor kinase-like Gene Family AT2G33580 48.865 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mtr3g2570 Pkinase 9.2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2570 - - gmx:100818534 757.673